RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ADAMTS16Q8TE57 1224 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 MTMR9Q96QG7 549 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 TRIM56Q9BRZ2 755 aaKnown RBP16.3■□□□□ 0.2
RTN3-205ENST00000356000 CAAP1Q9H8G2 361 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 DAPK2Q9UIK4 370 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 DNAJC12Q9UKB3 198 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 DNM3Q9UQ16 869 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
RTN3-205ENST00000356000 A0A1W2PPW3 197 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 H3BMQ9 156 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 ACAT1P24752 427 aaKnown RBP16.29■□□□□ 0.2
RTN3-205ENST00000356000 SLC1A1P43005 524 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 CABP4P57796 275 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 CENPCQ03188 943 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 BNIP3Q12983 259 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 ORC2Q13416 577 aaPredicted RBP16.29■□□□□ 0.2
RTN3-205ENST00000356000 ITPK1Q13572 414 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 SCARA3Q6AZY7 606 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 PLEKHA7Q6IQ23 1121 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 EXD1Q8NHP7 514 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 COG8Q96MW5 612 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 AGPAT1Q99943 283 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 OLAHQ9NV23 265 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
RTN3-205ENST00000356000 A6NL46 340 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 F5H6K3 240 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 MYO1DO94832 1006 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 CRYZL1O95825 349 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 KLRC2P26717 231 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 STAT2P52630 851 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 AQP5P55064 265 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 KCNQ4P56696 695 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 CHRNEQ04844 493 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 GALNT2Q10471 571 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 IGFN1Q86VF2 1251 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 HEATR4Q86WZ0 1026 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 RMND5BQ96G75 393 aaPredicted RBP16.29■□□□□ 0.2
RTN3-205ENST00000356000 FAM111AQ96PZ2 611 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 ALPK1Q96QP1 1244 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 KLF6Q99612 283 aaPredicted RBP16.29■□□□□ 0.2
RTN3-205ENST00000356000 PNPLA3Q9NST1 481 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 MKS1Q9NXB0 559 aa16.29■□□□□ 0.2
RTN3-205ENST00000356000 NFASCO94856 1347 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 A8MU76 341 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 GIPC1O14908 333 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 KLHL41O60662 606 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 LRRN2O75325 713 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 AKAP3O75969 853 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 LDHBP07195 334 aaKnown RBP16.28■□□□□ 0.2
RTN3-205ENST00000356000 ALOX5P09917 674 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 CARM1Q86X55 608 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 MINDY2Q8NBR6 621 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 ETNPPLQ8TBG4 499 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 RILPQ96NA2 401 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 MARCH7Q9H992 704 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 MOV10Q9HCE1 1003 aaKnown RBP16.28■□□□□ 0.2
RTN3-205ENST00000356000 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
RTN3-205ENST00000356000 SLC8A2Q9UPR5 921 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 ATP11BQ9Y2G3 1177 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 I3L4J1 428 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 DCKP27707 260 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 GRIK5Q16478 980 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 FGD3Q5JSP0 725 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 AARS2Q5JTZ9 985 aaKnown RBP16.28■□□□□ 0.2
RTN3-205ENST00000356000 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
RTN3-205ENST00000356000 DEFB107AQ8IZN7 70 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 MIGA1Q8NAN2 632 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 SDR42E1Q8WUS8 393 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 FBXL18Q96ME1 805 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 RNF38Q9H0F5 515 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 ANLNQ9NQW6 1124 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 FKBP14Q9NWM8 211 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
RTN3-205ENST00000356000 H0YJX3 145 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 PSMD11O00231 422 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.2
RTN3-205ENST00000356000 RFC4P35249 363 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 CCDC58Q4VC31 144 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 KRT79Q5XKE5 535 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 ZFP1Q6P2D0 407 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 SLC38A6Q8IZM9 456 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 LILRA2Q8N149 483 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 TERB1Q8NA31 727 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 APOPT1Q96IL0 206 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 ACAP3Q96P50 834 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 HERC2P3Q9BVR0 1158 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 MXD3Q9BW11 206 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 CYP4F11Q9HBI6 524 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.2
RTN3-205ENST00000356000 AP4S1Q9Y587 144 aa16.27■□□□□ 0.2
RTN3-205ENST00000356000 CDK2AP1O14519 115 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 FAM189A1O60320 539 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 SNAP91O60641 907 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 UFL1O94874 794 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 MMP10P09238 476 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms