RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SPEM2Q0P670 501 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 PPP2R5DQ14738 602 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 CCDC40Q4G0X9 1142 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 PKDCCQ504Y2 493 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 Q6ZNB5 142 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 HTR3DQ70Z44 454 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 SYT13Q7L8C5 426 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 KBTBD6Q86V97 674 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 DDX42Q86XP3 938 aaKnown RBP eCLIP17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 TRIM59Q8IWR1 403 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 KIAA1958Q8N8K9 716 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 UBA3Q8TBC4 463 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 SPHK2Q9NRA0 654 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
PDLIM7-201ENST00000355572 CEP250Q9BV73 2442 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 O00370 1275 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 SLC9A3R1O14745 358 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 STC2O76061 302 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 KAT7O95251 611 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 ATP5C1P36542 298 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 ID4P47928 161 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 AMPD2Q01433 879 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 APBA1Q02410 837 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 CCDC6Q16204 474 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 FBXO43Q4G163 708 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 RRAGAQ7L523 313 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 MIB1Q86YT6 1006 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 ALLCQ8N6M5 410 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 ANKRD52Q8NB46 1076 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 KREMEN1Q96MU8 473 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 SRRTQ9BXP5 876 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 ULBP1Q9BZM6 244 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 TBC1D14Q9P2M4 693 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 SLC8A2Q9UPR5 921 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 INVSQ9Y283 1065 aa17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-201ENST00000355572 SGK1O00141 431 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 HOXC11O43248 304 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 ADAM23O75077 832 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 TULP3O75386 442 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 BRD2P25440 801 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 TIE1P35590 1138 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 TKTL1P51854 596 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 KCNH2Q12809 1159 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 PAK1Q13153 545 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 STIM1Q13586 685 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 LAIR1Q6GTX8 287 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 TPGS1Q6ZTW0 290 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 TOGARAM2Q6ZUX3 1019 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 IRF2BP1Q8IU81 584 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 IL17RCQ8NAC3 791 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 GAB3Q8WWW8 586 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 PNKPQ96T60 521 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 TPSD1Q9BZJ3 242 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 NACA2Q9H009 215 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 METTL14Q9HCE5 456 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
PDLIM7-201ENST00000355572 A0A0A0MRY4 1105 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 PIK3R2O00459 728 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 PMM2O15305 246 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 ATG13O75143 517 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 ADH1CP00326 375 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 HMBSP08397 361 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 CD19P15391 556 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 MARSP56192 900 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 UBE2HP62256 183 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 GAD2Q05329 585 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 EFEMP1Q12805 493 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 TMEM270Q6UE05 265 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 FRMD1Q8N878 549 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 TXNDC5Q8NBS9 432 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 OTUB2Q96DC9 234 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 SMOC1Q9H4F8 434 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 ARHGEF4Q9NR80 690 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 PLK2Q9NYY3 685 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 MMP17Q9ULZ9 603 aa17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 MUC22E2RYF6 1773 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-201ENST00000355572 AXIN1O15169 862 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 RPP40O75818 363 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 KLF8O95600 359 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 BCKDHBP21953 392 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 EIF2DP41214 584 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 RGS7P49802 495 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 ZNF132P52740 706 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 ADIGQ0VDE8 80 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 RSPO4Q2I0M5 234 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 ANO4Q32M45 955 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 SGO2Q562F6 1265 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 PM20D1Q6GTS8 502 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 KLHDC10Q6PID8 442 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 CEP68Q76N32 757 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 CAMKK1Q8N5S9 505 aa17.57■□□□□ 0.4
PDLIM7-201ENST00000355572 EHBP1Q8NDI1 1231 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms