RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 APOC1P02654 83 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TFB1MQ8WVM0 346 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 DPF3Q92784 378 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 RIT1Q92963 219 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 LRRC1Q9BTT6 524 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 KLHL28Q9NXS3 571 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 CA8P35219 290 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PTDSS1P48651 473 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 PUDPQ08623 228 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 DRAP1Q14919 205 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 FAM47AQ5JRC9 791 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 OTUD7BQ6GQQ9 843 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 ARHGEF38Q9NXL2 777 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 USP17L12C9JPN9 530 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 USP17L21D6R901 530 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 CYP2E1P05181 493 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 PRKCQQ04759 706 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TRAF2Q12933 501 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 SMCO1Q147U7 214 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 ZNF568Q3ZCX4 644 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PCDH9Q9HC56 1237 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 SNX13Q9Y5W8 968 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 ASTN2O75129 1339 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 MYO1GB0I1T2 1018 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PRMT5O14744 637 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 SIN3BO75182 1162 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 KITP10721 976 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PPP3CCP48454 512 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TMEM44Q2T9K0 475 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 C18orf8Q96DM3 657 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PLIN2Q99541 437 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 CINPQ9BW66 212 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 NOL11Q9H8H0 719 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 SDR42E2A6NKP2 422 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 VNN2O95498 520 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 FMO5P49326 533 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 STARP49675 285 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 S100A12P80511 92 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TNK2Q07912 1038 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 HTATIP2Q9BUP3 242 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 AHSPQ9NZD4 102 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 MEGF6O75095 1541 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 B2RBV5 119 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TMEM132CQ8N3T6 1108 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 ANO3Q9BYT9 981 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 C6orf62Q9GZU0 229 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 CFL2Q9Y281 166 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 UBDO15205 165 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 CCNE2O96020 404 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 CYP27A1Q02318 531 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 FBXO43Q4G163 708 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 DCAF6Q58WW2 860 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TMC3Q7Z5M5 1100 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 NARS2Q96I59 477 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 EMILIN2Q9BXX0 1053 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 DSN1Q9H410 356 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 A0A1W2PRG6 482 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 SHOX2O60902 331 aaPredicted RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 CRABP2P29373 138 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 GALNT3Q14435 633 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 HIST2H2AA3Q6FI13 130 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 SNRNP48Q6IEG0 339 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 METTL3Q86U44 580 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 CDH9Q9ULB4 789 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 ITM2BQ9Y287 266 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 PPRC1Q5VV67 1664 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 TRIM66O15016 1216 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 RARBP10826 455 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 KRT33BQ14525 404 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 UGT2B11O75310 529 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 PAICSP22234 425 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 OXCT1P55809 520 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 VBP1P61758 197 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 SLC12A1Q13621 1099 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 PI4K2BQ8TCG2 481 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 FAM149B1Q96BN6 582 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 HES6Q96HZ4 224 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 MMTAG2Q9BU76 263 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 ST3GAL5Q9UNP4 418 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 KRT28Q7Z3Y7 464 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 NUP93Q8N1F7 819 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 TMEM8AQ9HCN3 771 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 IGSF1Q8N6C5 1336 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 A0A088AWK7 358 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 ERN1O75460 977 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 PET100P0DJ07 73 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 ZNF10P21506 573 aaPredicted RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 ZNF235Q14590 738 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 LONRF1Q17RB8 773 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
HTT-201ENST00000355072 SLC30A8Q8IWU4 369 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 CAB39LQ9H9S4 337 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 PALD1Q9ULE6 856 aa8.25□□□□□ -1.09
HTT-201ENST00000355072 PRELID1Q9Y255 219 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms