RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 PDGFRBP09619 1106 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 NUP62P37198 522 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 KRT6CP48668 564 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PRKAA2P54646 552 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 RPL10AP62906 217 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 ELF3P78545 371 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 CDK16Q00536 496 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PPIDQ08752 370 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 EPS8Q12929 822 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 DGUOKQ16854 277 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 KCNT1Q5JUK3 1230 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 IL31Q6EBC2 164 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ZNF34Q8IZ26 560 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 C19orf18Q8NEA5 215 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 SLC25A23Q9BV35 468 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 KLHL31Q9H511 634 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ETAA1Q9NY74 926 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 DAPK2Q9UIK4 370 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 UBQLN1Q9UMX0 589 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 ATXN2Q99700 1313 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 PNMA8CA0A1B0GUJ8 204 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 AHCYL1O43865 530 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ALOX15P16050 662 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 VAC14Q08AM6 782 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 DPP10Q8N608 796 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PPP1R10Q96QC0 940 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 CLEC4MQ9H2X3 399 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 SEMA6BQ9H3T3 888 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ERAP1Q9NZ08 941 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ARHGAP20Q9P2F6 1191 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 HSMCR30P0CW71 290 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ST8SIA6P61647 398 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PSMC6P62333 389 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ITGA9Q13797 1035 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 NDUFA5Q16718 116 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 STRIP1Q5VSL9 837 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 ZNF772Q68DY9 489 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 TIGD7Q6NT04 549 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 CROCCP3Q8IVE0 287 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 TTC30BQ8N4P2 665 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PRCCQ92733 491 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 C9orf16Q9BUW7 83 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 VTA1Q9NP79 307 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 MAP2K7O14733 419 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PMPCBO75439 489 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 CSPG5O95196 566 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 SGPL1O95470 568 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 GH1P01241 217 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 GLRBP48167 497 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 BAATQ14032 418 aaPredicted RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 ACTL9Q8TC94 416 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 MRPL48Q96GC5 212 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 TMEM121Q9BTD3 319 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 TLR10Q9BXR5 811 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 RNPEPL1Q9HAU8 725 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 CYLDQ9NQC7 956 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 PDGFCQ9NRA1 345 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 UBAP1Q9NZ09 502 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 RPL26L1Q9UNX3 145 aaKnown RBP6.71□□□□□ -1.34
TTC3-201ENST00000354749 AXIN2Q9Y2T1 843 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 COMMD3-BMI1R4GMX3 469 aa6.71□□□□□ -1.34
TTC3-201ENST00000354749 DNALI1O14645 258 aaPredicted RBP6.7□□□□□ -1.34
TTC3-201ENST00000354749 CLOCKO15516 846 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 ALDH1A1P00352 501 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 CHI3L1P36222 383 aaPredicted RBP6.7□□□□□ -1.34
TTC3-201ENST00000354749 ETFBP38117 255 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 RFX5P48382 616 aaPredicted RBP6.7□□□□□ -1.34
TTC3-201ENST00000354749 CDK7P50613 346 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 MAD2L1Q13257 205 aaPredicted RBP6.7□□□□□ -1.34
TTC3-201ENST00000354749 BMPR2Q13873 1038 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 C16orf72Q14CZ0 275 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 TAB1Q15750 504 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 FUT11Q495W5 492 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 OR8H2Q8N162 312 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 MYO1HQ8N1T3 1032 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 OSBPL10Q9BXB5 764 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 NRDE2Q9H7Z3 1164 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 USP18Q9UMW8 372 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 AP4E1Q9UPM8 1137 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 ACTL7BQ9Y614 415 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 RRM1P23921 792 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 HARS2P49590 506 aaKnown RBP6.7□□□□□ -1.34
TTC3-201ENST00000354749 FAXCQ5TGI0 409 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 CBWD2Q8IUF1 395 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 MREGQ8N565 214 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 TBC1D16Q8TBP0 767 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 BLOC1S5Q8TDH9 187 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 FAM172AQ8WUF8 416 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 TATDN2Q93075 761 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 OMA1Q96E52 524 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 KATNAL1Q9BW62 490 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 TRPC7Q9HCX4 862 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 UBA2Q9UBT2 640 aaPredicted RBP6.7□□□□□ -1.34
TTC3-201ENST00000354749 TAF6LQ9Y6J9 622 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 MEI4A8MW99 385 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 TK2O00142 265 aa6.7□□□□□ -1.34
TTC3-201ENST00000354749 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.341e-23■■■■■ 42.4
TTC3-201ENST00000354749 ITGALP20701 1170 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms