RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 NUMBLQ9Y6R0 609 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 SMIM31A0A1B0GVY4 71 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 ANKRD63C9JTQ0 380 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 ADCY3O60266 1144 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 CLASP2O75122 1294 aaKnown RBP11.25□□□□□ -0.61
SND1-201ENST00000354725 LMNAP02545 664 aaKnown RBP11.25□□□□□ -0.61
SND1-201ENST00000354725 CES1P23141 567 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 SLC29A2Q14542 456 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 CNGA2Q16280 664 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 CCDC142Q17RM4 750 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 WASHC2DQ5SRD0 308 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 ARMC4Q5T2S8 1044 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 KIAA1614Q5VZ46 1190 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 FAM13CQ8NE31 585 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 PLEKHO2Q8TD55 490 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 EPS8L1Q8TE68 723 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 SLC20A1Q8WUM9 679 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 EGLN2Q96KS0 407 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 WNT8AQ9H1J5 351 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 SELENONQ9NZV5 590 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 PRKAG3Q9UGI9 489 aa11.25□□□□□ -0.61
SND1-201ENST00000354725 SMIM23A6NLE4 172 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 IFRD1O00458 451 aaPredicted RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 SNX3O60493 162 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 MYL3P08590 195 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 DNAJB1P25685 340 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 MYL6P60660 151 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 IFI35P80217 286 aaPredicted RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 MYL7Q01449 175 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 PFKPQ01813 784 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 INO80DQ53TQ3 878 aaPredicted RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 SIGIRRQ6IA17 410 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 B3GNT6Q6ZMB0 384 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 DDX1Q92499 740 aaKnown RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 RBM14Q96PK6 669 aaKnown RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 SEMA4AQ9H3S1 761 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ETNK1Q9HBU6 452 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 SATB2Q9UPW6 733 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 SNX9Q9Y5X1 595 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 GOLGA8MH3BSY2 632 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ZBTB39O15060 712 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 STRNO43815 780 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 CYP2C8P10632 490 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ETV3P41162 512 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ARHGEF19Q8IW93 802 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 TTC8Q8TAM2 541 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ZNF214Q9UL59 606 aaPredicted RBP11.24□□□□□ -0.61
SND1-201ENST00000354725 COQ4Q9Y3A0 265 aa11.24□□□□□ -0.61
SND1-201ENST00000354725 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 GTF2H1P32780 548 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 NAA20P61599 178 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 SNRPFP62306 86 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 DLG4P78352 724 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 ENPEPQ07075 957 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 ARHGAP24Q8N264 748 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 SLC38A10Q9HBR0 1119 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TCRBV7S2A1N4TA0A589 114 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 VWA5AO00534 786 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 FSCN2O14926 492 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TRIM49P0CI25 452 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TRIM49CP0CI26 452 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 SERPINB6P35237 376 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 COILP38432 576 aaPredicted RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 GPC5P78333 572 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 CCDC6Q16204 474 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TRIM71Q2Q1W2 868 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 VSTM1Q6UX27 236 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 DDHD1Q8NEL9 900 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 FRS2Q8WU20 508 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 DGCR14Q96DF8 476 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 FOXP3Q9BZS1 431 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 PIH1D1Q9NWS0 290 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 DDX43Q9NXZ2 648 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 WHRNQ9P202 907 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 FEM1BQ9UK73 627 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 GJB6O95452 261 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 CHRNB1P11230 501 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 PTPN2P17706 415 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 KRT20P35900 424 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 DENND2CQ68D51 928 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TWF2Q6IBS0 349 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 GADL1Q6ZQY3 521 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 ANO5Q75V66 913 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 TRMT10CQ7L0Y3 403 aaKnown RBP11.23□□□□□ -0.61
SND1-201ENST00000354725 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
SND1-201ENST00000354725 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms