RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 USP6NLQ92738 828 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-202ENST00000354537 SDCBP2Q9H190 292 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 USP29Q9HBJ7 922 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 WDR81Q562E7 1941 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 LRRIQ4A6NIV6 560 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 FAM159BA6NKW6 160 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 FAM189A1O60320 539 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 PIAS1O75925 651 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 OATP04181 439 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 CD48P09326 243 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 UBTFL6P0CB48 400 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-202ENST00000354537 TGM2P21980 687 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 CPA2P48052 419 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 PDK2Q15119 407 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 SMTNL2Q2TAL5 461 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 KCNT1Q5JUK3 1230 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 DHDDSQ86SQ9 333 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 CTAGE3PQ8IX95 158 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 TUBGCP5Q96RT8 1024 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ZNF487B1APH4 448 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 TOM1L1O75674 476 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 RGS20O76081 388 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 MMP10P09238 476 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 UQCRBP14927 111 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ASPAP45381 313 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 KDSRQ06136 332 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 LSAMPQ13449 338 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 MED21Q13503 144 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ITGA9Q13797 1035 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 OR6Y1Q8NGX8 325 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 TMEM143Q96AN5 459 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 RILPQ96NA2 401 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 BTBD9Q96Q07 612 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 KLHL4Q9C0H6 718 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 RNF146Q9NTX7 359 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 PCMTD2Q9NV79 361 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 MYH9P35579 1960 aaKnown RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 CASQ2O14958 399 aaPredicted RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 PENKP01210 267 aaPredicted RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 PRDX6P30041 224 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 L1CAMP32004 1257 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 MAGEA3P43357 314 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ZNF143P52747 638 aaPredicted RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ARHGAP8P85298 464 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 TUBB3Q13509 450 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ARHGAP22Q7Z5H3 698 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 GSDMBQ8TAX9 411 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 PIWIL2Q8TC59 973 aaKnown RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ACTRT2Q8TDY3 377 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 CFAP36Q96G28 342 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 RNF157Q96PX1 679 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 CNPY3Q9BT09 278 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
CAPN9-202ENST00000354537 TMEM39BQ9GZU3 492 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 ZNF302Q9NR11 478 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 DNAJC28Q9NX36 388 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 PPM1HQ9ULR3 514 aa11.84□□□□□ -0.51
CAPN9-202ENST00000354537 CXorf49A8MYA2 514 aaPredicted RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 VWA5AO00534 786 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 OGTO15294 1046 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 BAG2O95816 211 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ALOX15P16050 662 aaPredicted RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 TPSB2P20231 275 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ICAM3P32942 547 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ALDH18A1P54886 795 aaKnown RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 LAMB3Q13751 1172 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 TPSAB1Q15661 275 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ZNF699Q32M78 642 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 CCDC33Q8N5R6 958 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 TTC1Q99614 292 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 CALN1Q9BXU9 219 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 XYLT2Q9H1B5 865 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 FAM124BQ9H5Z6 455 aaPredicted RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 XAB2Q9HCS7 855 aaKnown RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 CPSF3Q9UKF6 684 aaKnown RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 APOBEC2Q9Y235 224 aaKnown RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 IGKV6D-21A0A0A0MT36 114 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 SLC15A5A6NIM6 579 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 H7C0C1 242 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ZCCHC18P0CG32 403 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ACAT1P24752 427 aaKnown RBP11.83□□□□□ -0.52
CAPN9-202ENST00000354537 GRK2P25098 689 aa11.83□□□□□ -0.52
CAPN9-202ENST00000354537 ATP5OP48047 213 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms