RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 HS2ST1Q7LGA3 356 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 GLRX5Q86SX6 157 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 GALNT15Q8N3T1 639 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 LRRC52Q8N7C0 313 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 MNS1Q8NEH6 495 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 SCFD1Q8WVM8 642 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 SNX21Q969T3 373 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 CALML4Q96GE6 196 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 ZNF419Q96HQ0 510 aaPredicted RBP11.9□□□□□ -0.5
RTN3-204ENST00000354497 ACOX2Q99424 681 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
RTN3-204ENST00000354497 TM7SF3Q9NS93 570 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
RTN3-204ENST00000354497 KIAA1522Q9P206 1035 aaPredicted RBP11.9□□□□□ -0.5
RTN3-204ENST00000354497 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
RTN3-204ENST00000354497 ITGA11Q9UKX5 1188 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 CDH9Q9ULB4 789 aa11.9□□□□□ -0.5
RTN3-204ENST00000354497 CEP192Q8TEP8 1941 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 PLXNB3Q9ULL4 1909 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 F8VP50 259 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 CILPO75339 1184 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 C1QL1O75973 258 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 OAS1P00973 400 aaKnown RBP11.89□□□□□ -0.51
RTN3-204ENST00000354497 TMEM191BP0C7N4 346 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 NCAM1P13591 858 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 PLA2G2AP14555 144 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 LMO2P25791 158 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 CD6P30203 668 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 NOP2P46087 812 aaKnown RBP11.89□□□□□ -0.51
RTN3-204ENST00000354497 ZNF131P52739 623 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 RBP5P82980 135 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 MAPRE1Q15691 268 aaKnown RBP11.89□□□□□ -0.51
RTN3-204ENST00000354497 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 MDH1BQ5I0G3 518 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 ZNF605Q86T29 641 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 BBS7Q8IWZ6 715 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 ETFBKMTQ8IXQ9 262 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 KIAA1958Q8N8K9 716 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 KCNN1Q92952 543 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 SLITRK1Q96PX8 696 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 CDC6Q99741 560 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 TTLL2Q9BWV7 592 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 NACA2Q9H009 215 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 SPTLC3Q9NUV7 552 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 GDAP2Q9NXN4 497 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 RBAKQ9NYW8 714 aaPredicted RBP11.89□□□□□ -0.51
RTN3-204ENST00000354497 DKK4Q9UBT3 224 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 ANAPC1Q9H1A4 1944 aa11.89□□□□□ -0.51
RTN3-204ENST00000354497 A0A087WV48 116 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 GOLGA8IPA6NC78 632 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 GOLGA8JA6NMD2 632 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 NEDD8-MDP1E9PL57 170 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 GABRDO14764 452 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 HOXC11O43248 304 aaPredicted RBP11.88□□□□□ -0.51
RTN3-204ENST00000354497 OLFM2O95897 454 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 MYO1EQ12965 1108 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 POSTNQ15063 836 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 HLA-BQ31612 363 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 TMEM25Q86YD3 366 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 BRSK2Q8IWQ3 736 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 ZSWIM2Q8NEG5 633 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 OTUB2Q96DC9 234 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 TOE1Q96GM8 510 aaKnown RBP11.88□□□□□ -0.51
RTN3-204ENST00000354497 KIF2CQ99661 725 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 LLPHQ9BRT6 129 aaKnown RBP11.88□□□□□ -0.51
RTN3-204ENST00000354497 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
RTN3-204ENST00000354497 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 FAM53CQ9NYF3 392 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 HCN2Q9UL51 889 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.88□□□□□ -0.51
RTN3-204ENST00000354497 FNDC3AQ9Y2H6 1198 aaKnown RBP11.88□□□□□ -0.51
RTN3-204ENST00000354497 STYXL1Q9Y6J8 313 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 PI4KAP42356 2102 aa11.88□□□□□ -0.51
RTN3-204ENST00000354497 ATXN7O15265 892 aaPredicted RBP11.87□□□□□ -0.51
RTN3-204ENST00000354497 FLRT2O43155 660 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 COCHO43405 550 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 ITPKBP27987 946 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 UBA7P41226 1012 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
RTN3-204ENST00000354497 PPP1R15BQ5SWA1 713 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 DCAF12L1Q5VU92 463 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 LRRC69Q6ZNQ3 347 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 KBTBD7Q8WVZ9 684 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 SNX19Q92543 992 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 PCED1BQ96HM7 432 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 ANKRD36BP1Q96IX9 119 aa11.87□□□□□ -0.51
RTN3-204ENST00000354497 MRGPRX1Q96LB2 322 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms