RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SCUBE3Q8IX30 993 aa23.01■■□□□ 1.27
UPF3A-201ENST00000351487 LRMDAQ9H2I8 198 aa23.01■■□□□ 1.27
UPF3A-201ENST00000351487 SNTG2Q9NY99 539 aa23.01■■□□□ 1.27
UPF3A-201ENST00000351487 TRIM33Q9UPN9 1127 aa23.01■■□□□ 1.27
UPF3A-201ENST00000351487 HEY1Q9Y5J3 304 aa23.01■■□□□ 1.27
UPF3A-201ENST00000351487 GOLGA8RI6L899 631 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 C2CD2LO14523 706 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 SCNN1AP37088 669 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 DUSP28Q4G0W2 176 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 FYB2Q5VWT5 728 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 C4orf22Q6V702 233 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 ARCQ7LC44 396 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 CHSY1Q86X52 802 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 BEST2Q8NFU1 509 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 TACO1Q9BSH4 297 aaKnown RBP23■■□□□ 1.27
UPF3A-201ENST00000351487 ETNK1Q9HBU6 452 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 ETNK2Q9NVF9 386 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 TUBGCP4Q9UGJ1 667 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 TTLL3Q9Y4R7 772 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 ETV4P43268 484 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 DPYSL2Q16555 572 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 KIZQ2M2Z5 673 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 SLC26A9Q7LBE3 791 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 L3MBTL3Q96JM7 780 aaPredicted RBP23■■□□□ 1.27
UPF3A-201ENST00000351487 SERAC1Q96JX3 654 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 NRDE2Q9H7Z3 1164 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 POPDC2Q9HBU9 364 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 SLC45A1Q9Y2W3 748 aa23■■□□□ 1.27
UPF3A-201ENST00000351487 LPXNO60711 386 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 AVILO75366 819 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 EZRP15311 586 aaKnown RBP22.99■■□□□ 1.27
UPF3A-201ENST00000351487 SMPD1P17405 629 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 SLC45A4Q5BKX6 768 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 CDKL3Q8IVW4 592 aaPredicted RBP22.99■■□□□ 1.27
UPF3A-201ENST00000351487 MCUQ8NE86 351 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 CENPIQ92674 756 aaPredicted RBP22.99■■□□□ 1.27
UPF3A-201ENST00000351487 LRRC39Q96DD0 335 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 KLF6Q99612 283 aaPredicted RBP22.99■■□□□ 1.27
UPF3A-201ENST00000351487 CNTN3Q9P232 1028 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 GTF2IRD1Q9UHL9 959 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 ZNF180Q9UJW8 692 aa22.99■■□□□ 1.27
UPF3A-201ENST00000351487 TOMM70O94826 608 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 RPL34P49207 117 aaKnown RBP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 FAAP100Q0VG06 881 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 DGKDQ16760 1214 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 SOWAHAQ2M3V2 549 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 PARP6Q2NL67 630 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 ALKAL1Q6UXT8 129 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 CAND1Q86VP6 1230 aaKnown RBP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 SLC26A11Q86WA9 606 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 INPP5DQ92835 1189 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 RAB3IPQ96QF0 476 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 B3GNT5Q9BYG0 378 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 GCOM2Q9BZD3 368 aaPredicted RBP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 MANSC1Q9H8J5 431 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 TROVE2P10155 538 aaKnown RBP eCLIP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 PRKCHP24723 683 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 CYP2F1P24903 491 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 MAGEA3P43357 314 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 CDC42EP1Q00587 391 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 PCBP1Q15365 356 aaKnown RBP eCLIP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 SYCP2LQ5T4T6 812 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 EIF2AQ9BY44 585 aaKnown RBP22.98■■□□□ 1.27
UPF3A-201ENST00000351487 MORF4L1Q9UBU8 362 aa22.98■■□□□ 1.27
UPF3A-201ENST00000351487 RRN3P2A6NIE6 340 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 PDHXO00330 501 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 TRDMT1O14717 391 aaKnown RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 GSTA2P09210 222 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 L1CAMP32004 1257 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 EPHX2P34913 555 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 BST2Q10589 180 aaKnown RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 C9orf57Q5W0N0 161 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 NOTUMQ6P988 496 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 NLRP9Q7RTR0 991 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 CATSPER4Q7RTX7 472 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 OR6B3Q8NGW1 331 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 GPR32O75388 356 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 ECM2O94769 699 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 ZFXP17010 805 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 TFE3P19532 575 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 GCLCP48506 637 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 BCAT1P54687 386 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 E2F5Q15329 346 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 PPP6R3Q5H9R7 873 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 TTC39BQ5VTQ0 682 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 PRPF39Q86UA1 669 aaKnown RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 OR6J1Q8NGC5 347 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 AGAP11Q8TF27 550 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 C18orf25Q96B23 403 aaPredicted RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 SLC10A4Q96EP9 437 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 CFAP36Q96G28 342 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 TMEM237Q96Q45 408 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 C12orf65Q9H3J6 166 aaKnown RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 PLAC1Q9HBJ0 212 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 NPHS2Q9NP85 383 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 SETD4Q9NVD3 440 aa22.97■■□□□ 1.27
UPF3A-201ENST00000351487 ZC3H7BQ9UGR2 993 aaKnown RBP22.97■■□□□ 1.27
UPF3A-201ENST00000351487 WDR91A4D1P6 747 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 GCATO75600 419 aa22.96■■□□□ 1.27
UPF3A-201ENST00000351487 APRTP07741 180 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms