RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 FASTKD3Q14CZ7 662 aaKnown RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 VSTM1Q6UX27 236 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 C4orf22Q6V702 233 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 PPP1R21Q6ZMI0 780 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 CYP4X1Q8N118 509 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 GSTCDQ8NEC7 633 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 PYROXD1Q8WU10 500 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 MAML1Q92585 1016 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 ZNF317Q96PQ6 595 aaPredicted RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 GAD1Q99259 594 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 NRDE2Q9H7Z3 1164 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 PRDM16Q9HAZ2 1276 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 USP29Q9HBJ7 922 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 SLC24A2Q9UI40 661 aa17.38■□□□□ 0.37
SAMM50-201ENST00000350028 XPO7Q9UIA9 1087 aaKnown RBP17.38■□□□□ 0.37
SAMM50-201ENST00000350028 TMEM120BA0PK00 339 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 GOLGA8MH3BSY2 632 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 ADAMTS4O75173 837 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 ATP2C2O75185 946 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 DAB1O75553 588 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 CTSHP09668 335 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 BRAFP15056 766 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 CYP2F1P24903 491 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 RPL9P32969 192 aaKnown RBP17.37■□□□□ 0.37
SAMM50-201ENST00000350028 MLH1P40692 756 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 BASP1P80723 227 aaKnown RBP17.37■□□□□ 0.37
SAMM50-201ENST00000350028 RNASELQ05823 741 aaKnown RBP17.37■□□□□ 0.37
SAMM50-201ENST00000350028 CBLBQ13191 982 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 XRCC4Q13426 336 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 PAQR9Q6ZVX9 377 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 PSTKQ8IV42 348 aaKnown RBP17.37■□□□□ 0.37
SAMM50-201ENST00000350028 CCDC13Q8IYE1 715 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 PDIK1LQ8N165 341 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 ATP11CQ8NB49 1132 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 WNT8BQ93098 351 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 MED10Q9BTT4 135 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 FRMD8Q9BZ67 464 aaPredicted RBP17.37■□□□□ 0.37
SAMM50-201ENST00000350028 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 DHX35Q9H5Z1 703 aaKnown RBP17.37■□□□□ 0.37
SAMM50-201ENST00000350028 LRRC4Q9HBW1 653 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 FETUBQ9UGM5 382 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 AP4E1Q9UPM8 1137 aa17.37■□□□□ 0.37
SAMM50-201ENST00000350028 CENPFP49454 3210 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 MEIS3P2A8K0S8 358 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 MYO1CO00159 1063 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 CHADO15335 359 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 NR2C2P49116 596 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 RAB27AP51159 221 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 MRPS5P82675 430 aaKnown RBP17.36■□□□□ 0.37
SAMM50-201ENST00000350028 SLC25A52Q3SY17 297 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 PPP6R3Q5H9R7 873 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-201ENST00000350028 FNBP1LQ5T0N5 605 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 CDKL3Q8IVW4 592 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-201ENST00000350028 DEFB106AQ8N104 65 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 PRMT1Q99873 361 aaKnown RBP17.36■□□□□ 0.37
SAMM50-201ENST00000350028 KCNK9Q9NPC2 374 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 UBN1Q9NPG3 1134 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 XPNPEP3Q9NQH7 507 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 MIOSQ9NXC5 875 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 DDX43Q9NXZ2 648 aaKnown RBP17.36■□□□□ 0.37
SAMM50-201ENST00000350028 TBK1Q9UHD2 729 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
SAMM50-201ENST00000350028 HEY1Q9Y5J3 304 aa17.36■□□□□ 0.37
SAMM50-201ENST00000350028 CLDN5O00501 218 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 KCNN4O15554 427 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ZNF623O75123 536 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 KIAA0754O94854 1291 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 TMEM63AO94886 807 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ZBED1O96006 694 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ACAT1P24752 427 aaKnown RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 GCAP28676 217 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 NOS2P35228 1153 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 GPX6P59796 221 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 YWHAZP63104 245 aaKnown RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 CACNB2Q08289 660 aaPredicted RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ADCY1Q08828 1119 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ADIGQ0VDE8 80 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 TMED2Q15363 201 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 QPCTQ16769 361 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 MDH1BQ5I0G3 518 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 HP1BP3Q5SSJ5 553 aaPredicted RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 GKAP1Q5VSY0 366 aaPredicted RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 DSTYKQ6XUX3 929 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 AGMOQ6ZNB7 445 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 YTHDF3Q7Z739 585 aaKnown RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ANKMY2Q8IV38 441 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 SENP1Q9P0U3 644 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 RCOR3Q9P2K3 495 aaPredicted RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 TCRBV7S3A2A0A539 114 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ARL5CA6NH57 179 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 POC1B-GALNT4F8VUJ3 575 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 FBXO21O94952 628 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ASGR1P07306 291 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 FAM200BP0CF97 657 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 CREB1P16220 341 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 ATP2A2P16615 1042 aaKnown RBP17.35■□□□□ 0.37
SAMM50-201ENST00000350028 RBL1P28749 1068 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 SULT1E1P49888 294 aa17.35■□□□□ 0.37
SAMM50-201ENST00000350028 GAD2Q05329 585 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms