RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CLCN1P35523 988 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 USP8P40818 1118 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 IFNAR2P48551 515 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 KPNA1P52294 538 aaPredicted RBP23.21■■□□□ 1.31
SNX3-202ENST00000349379 DAOAP59103 153 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 DRAP1Q14919 205 aaPredicted RBP23.21■■□□□ 1.31
SNX3-202ENST00000349379 UBXN2BQ14CS0 331 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 SKOR2Q2VWA4 1001 aaPredicted RBP23.21■■□□□ 1.31
SNX3-202ENST00000349379 FKBP15Q5T1M5 1219 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 DENND1BQ6P3S1 775 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 PRSS33Q8NF86 280 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 TTC8Q8TAM2 541 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 ATP2A3Q93084 1043 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 LINC00597Q9H2U6 94 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 ECT2Q9H8V3 914 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 PCDHGC3Q9UN70 934 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 GALR2O43603 387 aaPredicted RBP23.2■■□□□ 1.3
SNX3-202ENST00000349379 GREM1O60565 184 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 DCNP07585 359 aaKnown RBP23.2■■□□□ 1.3
SNX3-202ENST00000349379 PNMA6AP0CW24 399 aaPredicted RBP23.2■■□□□ 1.3
SNX3-202ENST00000349379 RALAP11233 206 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 RGS7P49802 495 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 KLK7P49862 253 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 YWHAGP61981 247 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNX3-202ENST00000349379 STK32AQ8WU08 396 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 NDRG1Q92597 394 aaKnown RBP23.2■■□□□ 1.3
SNX3-202ENST00000349379 WBP2Q969T9 261 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 ERGIC2Q96RQ1 377 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 CDK5RAP1Q96SZ6 601 aaKnown RBP23.2■■□□□ 1.3
SNX3-202ENST00000349379 NACA2Q9H009 215 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 DNMT3LQ9UJW3 386 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 NUDT5Q9UKK9 219 aa23.2■■□□□ 1.3
SNX3-202ENST00000349379 SLC9A3R1O14745 358 aaPredicted RBP23.19■■□□□ 1.3
SNX3-202ENST00000349379 CDK11BP21127 795 aaKnown RBP23.19■■□□□ 1.3
SNX3-202ENST00000349379 PTK2Q05397 1052 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 TADA2BQ86TJ2 420 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 SIX6OS1Q8N1H7 587 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 CPA6Q8N4T0 437 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 DTWD2Q8NBA8 298 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 TTC16Q8NEE8 873 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 IRGQQ8WZA9 623 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 SLC4A5Q9BY07 1137 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 STK33Q9BYT3 514 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 CYTH4Q9UIA0 394 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 DAAM1Q9Y4D1 1078 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 ATG2BQ96BY7 2078 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 FANCMQ8IYD8 2048 aa23.19■■□□□ 1.3
SNX3-202ENST00000349379 YJEFN3A6XGL0 299 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 E7ENQ6 273 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 MDM4O15151 490 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 EPHB6O15197 1021 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 NFATC1O95644 943 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 CHRNB1P11230 501 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 LCP1P13796 627 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 GJA4P35212 333 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 MAGEA9P43362 315 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 RPS9P46781 194 aaKnown RBP23.18■■□□□ 1.3
SNX3-202ENST00000349379 TCF15Q12870 199 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 RAPGEF1Q13905 1077 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 SYCP1Q15431 976 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 C10orf120Q5SQS8 335 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 HTR3DQ70Z44 454 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 SLC47A2Q86VL8 602 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 OTUB2Q96DC9 234 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 TBC1D14Q9P2M4 693 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 CACNA1HO95180 2353 aa23.18■■□□□ 1.3
SNX3-202ENST00000349379 WDFY4Q6ZS81 3184 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 F8VZ95 297 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 NCAM2O15394 837 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 GAB4Q2WGN9 574 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 ZSCAN23Q3MJ62 389 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 BSPRYQ5W0U4 402 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 ADGRG2Q8IZP9 1017 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 WDTC1Q8N5D0 677 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 LHX5Q9H2C1 402 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 NDRG2Q9UN36 371 aaKnown RBP23.17■■□□□ 1.3
SNX3-202ENST00000349379 SH3BP1Q9Y3L3 701 aa23.17■■□□□ 1.3
SNX3-202ENST00000349379 PIK3R2O00459 728 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 TRDMT1O14717 391 aaKnown RBP23.16■■□□□ 1.3
SNX3-202ENST00000349379 SCAMP3O14828 347 aaKnown RBP23.16■■□□□ 1.3
SNX3-202ENST00000349379 FBXO21O94952 628 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 CYP17A1P05093 508 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 ACADSBP45954 432 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 JAM2P57087 298 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 BPIFB4P59827 614 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 UBXN1Q04323 297 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 TMEM110Q86TL2 294 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 CLEC4CQ8WTT0 213 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 CBX8Q9HC52 389 aa23.16■■□□□ 1.3
SNX3-202ENST00000349379 FAM207AQ9NSI2 230 aaPredicted RBP23.16■■□□□ 1.3
SNX3-202ENST00000349379 STC2O76061 302 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 AMPD2Q01433 879 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 GOLGA8FQ08AF8 430 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 GOLGA8DPQ0D2H9 430 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 PDCLQ13371 301 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 CCINQ13939 588 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 PON2Q15165 354 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 TMEM196Q5HYL7 178 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 BTBD8Q5XKL5 378 aa23.15■■□□□ 1.3
SNX3-202ENST00000349379 Q6ZNB5 142 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms