RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 F8W810 466 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 FAM155BO75949 473 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 DESP17661 470 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 SLC8A1P32418 973 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 FLT3LGP49771 235 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 ENPEPQ07075 957 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 DPYSL3Q14195 570 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 OASLQ15646 514 aaKnown RBP14.46□□□□□ -0.09
TRIM4-201ENST00000349062 APBB1IPQ7Z5R6 666 aaPredicted RBP14.46□□□□□ -0.09
TRIM4-201ENST00000349062 MAP7D3Q8IWC1 876 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 PDIK1LQ8N165 341 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 BBOF1Q8ND07 529 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 MCRS1Q96EZ8 462 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 PGM2Q96G03 612 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 TBCBQ99426 244 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 ETNK2Q9NVF9 386 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 IL1RAPL1Q9NZN1 696 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 SNX10Q9Y5X0 201 aa14.46□□□□□ -0.09
TRIM4-201ENST00000349062 CCT8L1PA6NM43 557 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 CLGNO14967 610 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 B3GAT3O94766 335 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 GOT1P17174 413 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 CTGFP29279 349 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 CD52P31358 61 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 RGS2P41220 211 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 CLCNKBP51801 687 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 LILRA4P59901 499 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 ELF3P78545 371 aaPredicted RBP14.46□□□□□ -0.1
TRIM4-201ENST00000349062 TRIM68Q6AZZ1 485 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 PPP1R2P3Q6NXS1 205 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 HFE2Q6ZVN8 426 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 SPDL1Q96EA4 605 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 NFKBIZQ9BYH8 718 aa14.46□□□□□ -0.1
TRIM4-201ENST00000349062 DDX43Q9NXZ2 648 aaKnown RBP14.46□□□□□ -0.1
TRIM4-201ENST00000349062 C3orf70A6NLC5 250 aaPredicted RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 DIAPH2O60879 1101 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 ATP6V1G2O95670 118 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 ELK3P41970 407 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 AP1B1Q10567 949 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 DNAJC3Q13217 504 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 TP53INP2Q8IXH6 220 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 ZCCHC9Q8N567 271 aaKnown RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 PPM1NQ8N819 430 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 LGMNQ99538 433 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 LBHD1Q9BQE6 289 aaPredicted RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 FAM129AQ9BZQ8 928 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 KRT82Q9NSB4 513 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 M0QYT0 321 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 APOL1O14791 398 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 CYP2F1P24903 491 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 CDH5P33151 784 aaPredicted RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 GRIA1P42261 906 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 BRCC3P46736 316 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 ARL4CP56559 192 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 GDF6Q6KF10 455 aaPredicted RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 SYDE1Q6ZW31 735 aaPredicted RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 BBS12Q6ZW61 710 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 TGS1Q96RS0 853 aaKnown RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 SIK2Q9H0K1 926 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 TRABDQ9H4I3 376 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 CNOT10Q9H9A5 744 aaKnown RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 RSAD1Q9HA92 442 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 AP4E1Q9UPM8 1137 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 KIF1CO43896 1103 aaKnown RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 CDH16O75309 829 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 ANP32DO95626 131 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 DRD4P21917 467 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 MMP13P45452 471 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 HDAC4P56524 1084 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 SLC8A3P57103 927 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 RNASEH2BQ5TBB1 312 aaKnown RBP14.45□□□□□ -0.1
TRIM4-201ENST00000349062 RASAL3Q86YV0 1011 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 IGDCC3Q8IVU1 814 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 PCDH19Q8TAB3 1148 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 MAF1Q9H063 256 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 ABCF3Q9NUQ8 709 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 MIOSQ9NXC5 875 aa14.45□□□□□ -0.1
TRIM4-201ENST00000349062 SMIM35A0A1B0GVV1 85 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 MYBPHLA2RUH7 354 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 ENO4A6NNW6 628 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 USP17L7P0C7H9 530 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 ARPP19P56211 112 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 SESN2P58004 480 aaPredicted RBP14.44□□□□□ -0.1
TRIM4-201ENST00000349062 OLIG2Q13516 323 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 SPARCL1Q14515 664 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 ERMARDQ5T6L9 678 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 SYPL2Q5VXT5 272 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 OLFML1Q6UWY5 402 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 SLC35B2Q8TB61 432 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 KBTBD7Q8WVZ9 684 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 PCDH9Q9HC56 1237 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 PCDH18Q9HCL0 1135 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 RBM47A0AV96 593 aaKnown RBP14.44□□□□□ -0.1
TRIM4-201ENST00000349062 KCNK1O00180 336 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 KRT4P19013 534 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 KCNJ2P63252 427 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 CAV1Q03135 178 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 LRRC38Q5VT99 294 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms