RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 ITGA11Q9UKX5 1188 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 APOBEC2Q9Y235 224 aaKnown RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 YDJCA8MPS7 323 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CCNT2O60583 730 aaKnown RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ENDOD1O94919 500 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ATG7O95352 703 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PIM1P11309 404 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ALDH18A1P54886 795 aaKnown RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ZNF394Q53GI3 561 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 RASSF3Q86WH2 238 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 XYLT1Q86Y38 959 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 EGFL6Q8IUX8 553 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 TAB3Q8N5C8 712 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ARFGAP1Q8N6T3 406 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 GSDMBQ8TAX9 411 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PPP4R1Q8TF05 950 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 TFAP2BQ92481 460 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 NIFKQ9BYG3 293 aaKnown RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MTMR12Q9C0I1 747 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 C10orf88Q9H8K7 445 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 POPDC2Q9HBU9 364 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 NRBP2Q9NSY0 501 aa10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC6B-202ENST00000347691 SMIM31A0A1B0GVY4 71 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 C2orf71A6NGG8 1288 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 SDR42E2A6NKP2 422 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 E5RJQ4 531 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PLSCR1O15162 318 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 RFPL1O75677 317 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PIAS1O75925 651 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ZBED1O96006 694 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 HARSP12081 509 aaKnown RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 GABRB2P47870 512 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CDH6P55285 790 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ZBTB41Q5SVQ8 909 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 FOXB2Q5VYV0 432 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CYS1Q717R9 158 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MCRS1Q96EZ8 462 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CNPY3Q9BT09 278 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 TCHPQ9BT92 498 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 KLHL4Q9C0H6 718 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 SDCBP2Q9H190 292 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 XAB2Q9HCS7 855 aaKnown RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PCSK1NQ9UHG2 260 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 BCLAF3A2AJT9 711 aaKnown RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ARHGAP42A6NI28 874 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ZNF143P52747 638 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 COPAP53621 1224 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MRPS5P82675 430 aaKnown RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 NAB1Q13506 487 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MAP7Q14244 749 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 KRT81Q14533 505 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PDSS2Q86YH6 399 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CDKL3Q8IVW4 592 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 EXOC8Q8IYI6 725 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 NDUFAF2Q8N183 169 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PIWIL2Q8TC59 973 aaKnown RBP10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CMTM5Q96DZ9 223 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 GMLQ99445 158 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ADPGKQ9BRR6 497 aa10.49□□□□□ -0.73
TRAPPC6B-202ENST00000347691 VWA5AO00534 786 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MAP3K13O43283 966 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 C1QAP02745 245 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CD48P09326 243 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 UQCRBP14927 111 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 GRK2P25098 689 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ASPAP45381 313 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 SP4Q02446 784 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 LAMB3Q13751 1172 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CNPY1Q3B7I2 92 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CDHR3Q6ZTQ4 885 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ARHGAP22Q7Z5H3 698 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CCNJLQ8IV13 435 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ZBTB8OSQ8IWT0 167 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 USP6NLQ92738 828 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 BTBD9Q96Q07 612 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PPP1R1BQ9UD71 204 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 FAM159BA6NKW6 160 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PRR5-ARHGAP8B1AHC4 643 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 APOL1O14791 398 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 KCNN4O15554 427 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PEX1O43933 1283 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 GLRA3O75311 464 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 TPSB2P20231 275 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 GPD1P21695 349 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PRDX6P30041 224 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 ARHGAP8P85298 464 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 TPSAB1Q15661 275 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 BOLA3Q53S33 107 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CFAP157Q5JU67 520 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 CCDC33Q8N5R6 958 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 PHC3Q8NDX5 983 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 RNF157Q96PX1 679 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 TUBGCP5Q96RT8 1024 aa10.48□□□□□ -0.73
TRAPPC6B-202ENST00000347691 MECRQ9BV79 373 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms