RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SMAD1Q15797 465 aaKnown RBP15.9■□□□□ 0.14
LMNA-201ENST00000347559 FAXCQ5TGI0 409 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 PDPK2PQ6A1A2 396 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 MIER3Q7Z3K6 550 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 BBS5Q8N3I7 341 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 PIWIL2Q8TC59 973 aaKnown RBP15.9■□□□□ 0.14
LMNA-201ENST00000347559 PPP4R1Q8TF05 950 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 SLC35B4Q969S0 331 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 GFM2Q969S9 779 aaKnown RBP15.9■□□□□ 0.14
LMNA-201ENST00000347559 FAM213AQ9BRX8 229 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 MAN1C1Q9NR34 630 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 PNPOQ9NVS9 261 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 THAP1Q9NVV9 213 aa15.9■□□□□ 0.14
LMNA-201ENST00000347559 CD48P09326 243 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 GCNT1Q02742 428 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 FASTKD1Q53R41 847 aaKnown RBP15.89■□□□□ 0.13
LMNA-201ENST00000347559 DNAJC24Q6P3W2 148 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 POTEHQ6S545 545 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 C12orf56Q8IXR9 622 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ABRAQ8N0Z2 381 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 KCTD17Q8N5Z5 321 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 GRIN3AQ8TCU5 1115 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
LMNA-201ENST00000347559 ZNF778Q96MU6 729 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 CLEC11AQ9Y240 323 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 MYH9P35579 1960 aaKnown RBP15.89■□□□□ 0.13
LMNA-201ENST00000347559 A0A0B4J269 797 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 CFLARO15519 480 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 XPOTO43592 962 aaKnown RBP15.89■□□□□ 0.13
LMNA-201ENST00000347559 RFPL1O75677 317 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 GDF11O95390 407 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 THRAP10827 490 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ALOX15P16050 662 aaPredicted RBP15.89■□□□□ 0.13
LMNA-201ENST00000347559 TNNI1P19237 187 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ZFPM1Q8IX07 1006 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ARL10Q8N8L6 244 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 DCAF4Q8WV16 495 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 CMTM5Q96DZ9 223 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ZNF696Q9H7X3 374 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 CAAP1Q9H8G2 361 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 ITGA11Q9UKX5 1188 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 RAB26Q9ULW5 256 aa15.89■□□□□ 0.13
LMNA-201ENST00000347559 NOP56O00567 594 aaKnown RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 COL6A2P12110 1019 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 OXCT1P55809 520 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 RPL26P61254 145 aaKnown RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 PDE1CQ14123 709 aaPredicted RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 BTG3Q14201 252 aaPredicted RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 NRF1Q16656 503 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 CEP55Q53EZ4 464 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 LGSNQ5TDP6 509 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 TSPAN14Q8NG11 270 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 AGR3Q8TD06 166 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 WDR11Q9BZH6 1224 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 SELENONQ9NZV5 590 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 SNNO75324 88 aaPredicted RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 PORP16435 677 aaPredicted RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 EIF3EP60228 445 aaKnown RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 TUBB3Q13509 450 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 DPYSL3Q14195 570 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 CCDC92Q53HC0 331 aaPredicted RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 ZNF677Q86XU0 584 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 RFX6Q8HWS3 928 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 FAF2Q96CS3 445 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 MAF1Q9H063 256 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 ZC3H7BQ9UGR2 993 aaKnown RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 GAKO14976 1311 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 SMCHD1A6NHR9 2005 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 TMEM191CA6NGB0 347 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 KCNQ2O43526 872 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 KLHL41O60662 606 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 P4HBP07237 508 aaKnown RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 TMEM191BP0C7N4 346 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 GTF2BQ00403 316 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 NFIAQ12857 509 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 CYP4A22Q5TCH4 519 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 ERI1Q8IV48 349 aaKnown RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 ERLEC1Q96DZ1 483 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 KCNK16Q96T55 309 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 C6orf203Q9P0P8 240 aaPredicted RBP15.88■□□□□ 0.13
LMNA-201ENST00000347559 SORCS3Q9UPU3 1222 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 ZHX2Q9Y6X8 837 aa15.88■□□□□ 0.13
LMNA-201ENST00000347559 SH3PXD2BA1X283 911 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 PMM2O15305 246 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 SLC1A6P48664 564 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 PHEXP78562 749 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 CYP24A1Q07973 514 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 FLOT2Q14254 428 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 ZNF394Q53GI3 561 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 TATDN1Q6P1N9 297 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 PACS1Q6VY07 963 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 Q6ZNX1 250 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 CORO1BQ9BR76 489 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 NRDE2Q9H7Z3 1164 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 PLGRKTQ9HBL7 147 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 PLK2Q9NYY3 685 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
LMNA-201ENST00000347559 HEY1Q9Y5J3 304 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms