RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 BTBD8Q5XKL5 378 aa16■□□□□ 0.15
SRPK1-201ENST00000346162 ARHGEF19Q8IW93 802 aa16■□□□□ 0.15
SRPK1-201ENST00000346162 GPRC5AQ8NFJ5 357 aa16■□□□□ 0.15
SRPK1-201ENST00000346162 AUHQ13825 339 aaKnown RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CNPY1Q3B7I2 92 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ZNF618Q5T7W0 954 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 UCMAQ8WVF2 138 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 TPST1O60507 370 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ITGA2BP08514 1039 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 MMP13P45452 471 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 NT5DC3Q86UY8 548 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 IRF2BP1Q8IU81 584 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 FITM2Q8N6M3 262 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 OR6P1Q8NGX9 317 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CYP3A7-CYP3A51PA0A087WV96 503 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 XPAP23025 273 aaPredicted RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CYP3A7P24462 503 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CDK7P50613 346 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 MRPL28Q13084 256 aaKnown RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 LPIN1Q14693 890 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CCDC153Q494R4 210 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ANO7Q6IWH7 933 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 DEFB107AQ8IZN7 70 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 MAGEB5Q9BZ81 275 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 PLEKHA5Q9HAU0 1116 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 PCMTD2Q9NV79 361 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 MYRFQ9Y2G1 1151 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 REXO2Q9Y3B8 237 aaKnown RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 STARD13Q9Y3M8 1113 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 VWA5AO00534 786 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 DNALI1O14645 258 aaPredicted RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 TNPO2O14787 897 aaKnown RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CHEK2O96017 543 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ST13P50502 369 aaKnown RBP15.99■□□□□ 0.15
SRPK1-201ENST00000346162 CLEC16AQ2KHT3 1053 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 KCNT1Q5JUK3 1230 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ZBTB41Q5SVQ8 909 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 TRIM17Q9Y577 477 aa15.99■□□□□ 0.15
SRPK1-201ENST00000346162 PBX1P40424 430 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 MYL6P60660 151 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TRAF2Q12933 501 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 ORC1Q13415 861 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 GOLGA7BQ2TAP0 167 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 ZBTB8BQ8NAP8 495 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 VPS50Q96JG6 964 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 SPON1Q9HCB6 807 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 SYNPO2Q9UMS6 1093 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 GOLGA8TH3BQL2 631 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 MYCP01106 439 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 PGK2P07205 417 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 SNRPAP09012 282 aaKnown RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 STIP1P31948 543 aaKnown RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 PRKCIP41743 596 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 RPL21P46778 160 aaKnown RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 SERPINB9P50453 376 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 ARHGDIAP52565 204 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 CCDC85BQ15834 202 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TCHHL1Q5QJ38 904 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 CISHQ9NSE2 258 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TDRKHQ9Y2W6 561 aaKnown RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 PSMD10O75832 226 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TSTA3Q13630 321 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 FKBP1CQ5VVH2 108 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 NDUFAF2Q8N183 169 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 CLEC4FQ8N1N0 589 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 BAP1Q92560 729 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TRIM62Q9BVG3 475 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 PCDHAC2Q9Y5I4 1007 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 RNF225M0QZC1 329 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TFDP3Q5H9I0 405 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 ZNF75CPQ92670 426 aaPredicted RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 IFT43Q96FT9 208 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 ZNF518BQ9C0D4 1074 aa15.98■□□□□ 0.15
SRPK1-201ENST00000346162 TRNAU1APQ9NX07 287 aaKnown RBP15.98■□□□□ 0.15
SRPK1-201ENST00000346162 C6orf222P0C671 652 aaPredicted RBP15.97■□□□□ 0.15
SRPK1-201ENST00000346162 TPBGLP0DKB5 382 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 DSG3P32926 999 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 ACADSBP45954 432 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 TRIM25Q14258 630 aaKnown RBP15.97■□□□□ 0.15
SRPK1-201ENST00000346162 NR1D2Q14995 579 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 NDUFA5Q16718 116 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 EXD1Q8NHP7 514 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 OXNAD1Q96HP4 312 aaPredicted RBP15.97■□□□□ 0.15
SRPK1-201ENST00000346162 CNDP1Q96KN2 507 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 DENND2DQ9H6A0 471 aaPredicted RBP15.97■□□□□ 0.15
SRPK1-201ENST00000346162 NRDE2Q9H7Z3 1164 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 DCDC2CA8MYV0 355 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 WDR47O94967 919 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 CTSHP09668 335 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 DCAF6Q58WW2 860 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 ZBTB49Q6ZSB9 765 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 ABRAQ8N0Z2 381 aa15.97■□□□□ 0.15
SRPK1-201ENST00000346162 SPATA16Q9BXB7 569 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms