RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MOCS2O96007 188 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF268Q14587 947 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 CYP51A1Q16850 503 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 SH3RF1Q7Z6J0 888 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ERO1BQ86YB8 467 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 CAMK1DQ8IU85 385 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 PSMA8Q8TAA3 256 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 TFB1MQ8WVM0 346 aaKnown RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 WDR41Q9HAD4 459 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 GPBP1L1Q9HC44 474 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 PNPLA3Q9NST1 481 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 C6orf203Q9P0P8 240 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 DCDC2CA8MYV0 355 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 MATN2O00339 956 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 BNIP3LO60238 219 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ARPC4P59998 168 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 SBK1Q52WX2 424 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 AGAP9Q5VTM2 703 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ETNPPLQ8TBG4 499 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 OTUB1Q96FW1 271 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 APOL4Q9BPW4 351 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FANCEQ9HB96 536 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 TELO2Q9Y4R8 837 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FAM237AA0A1B0GTK4 181 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 EEF2KO00418 725 aaKnown RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 MRASO14807 208 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 CYP27B1O15528 508 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 NELFEP18615 380 aaKnown RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 SERPINH1P50454 418 aaKnown RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 KCTD2Q14681 263 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 ECHDC2Q86YB7 292 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 FAM49BQ9NUQ9 324 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 KLHL3Q9UH77 587 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 DGCR6Q14129 220 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 UBAP2LQ14157 1087 aaKnown RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 CNPY1Q3B7I2 92 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 TRIQKQ629K1 86 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 TRIM43BA6NCK2 446 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 SEC24AO95486 1093 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 PRKAA1Q13131 559 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 SPIDRQ14159 915 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 AKAP14Q86UN6 197 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 BEST2Q8NFU1 509 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 TRPC4APQ8TEL6 797 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 RMDN1Q96DB5 314 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 CCDC126Q96EE4 140 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 FAM84BQ96KN1 310 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-202ENST00000345356 TRIM54Q9BYV2 358 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
COL12A1-202ENST00000345356 MADDQ8WXG6 1647 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 C5orf58C9J3I9 102 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 FASTKQ14296 549 aaKnown RBP12.46□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF846Q147U1 533 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 ALYREFQ86V81 257 aaKnown RBP12.46□□□□□ -0.42
COL12A1-202ENST00000345356 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.42
COL12A1-202ENST00000345356 PIGBQ92521 554 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 ART4Q93070 314 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.42
COL12A1-202ENST00000345356 CIDEBQ9UHD4 219 aa12.46□□□□□ -0.42
COL12A1-202ENST00000345356 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PHKA2P46019 1235 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 FAM98BQ52LJ0 330 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 SAMD4BQ5PRF9 694 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 SCFD2Q8WU76 684 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PLEKHA8Q96JA3 519 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF333Q96JL9 665 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 C2orf40Q9H1Z8 148 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CHST12Q9NRB3 414 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 PCDHA10Q9Y5I2 948 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF263O14978 683 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 MED24O75448 989 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ALOX5P09917 674 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CHKAP35790 457 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 DRG2P55039 364 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 RTP1P59025 263 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CUL2Q13617 745 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 Q3C1V9 767 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ATP6AP1LQ52LC2 224 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 SGO1Q5FBB7 561 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 CATSPER4Q7RTX7 472 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 ATG16L2Q8NAA4 619 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 SPIRE2Q8WWL2 714 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 NSMCE2Q96MF7 247 aa12.45□□□□□ -0.42
COL12A1-202ENST00000345356 RNF145Q96MT1 663 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms