RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TDP1Q9NUW8 608 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 THG1LQ9NWX6 298 aaKnown RBP12.43□□□□□ -0.42
SNCA-202ENST00000345009 NOCTQ9UK39 431 aaKnown RBP12.43□□□□□ -0.42
SNCA-202ENST00000345009 TCF20Q9UGU0 1960 aaKnown RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 ANHXE9PGG2 379 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 SMAPO00193 183 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 TULP2O00295 520 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 ECI2O75521 394 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 GYPCP04921 128 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 SERPING1P05155 500 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 MMEP08473 750 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 CDH5P33151 784 aaPredicted RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 ATP5C1P36542 298 aaKnown RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 PRKCIP41743 596 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 NSFP46459 744 aaKnown RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 RPL34P49207 117 aaKnown RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 ZNF75DP51815 510 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 YWHAGP61981 247 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNCA-202ENST00000345009 ZNF268Q14587 947 aaPredicted RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 EFHC1Q5JVL4 640 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 KLHDC10Q6PID8 442 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 TOGARAM2Q6ZUX3 1019 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 TMC6Q7Z403 805 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 LAPTM4BQ86VI4 370 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 DDX42Q86XP3 938 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNCA-202ENST00000345009 SCUBE3Q8IX30 993 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 YAF2Q8IY57 180 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 ANKK1Q8NFD2 765 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 ELSPBP1Q96BH3 223 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 C18orf8Q96DM3 657 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 ZSWIM3Q96MP5 696 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 KCNK12Q9HB15 430 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 ABCC13Q9NSE7 274 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 OLA1Q9NTK5 396 aaKnown RBP12.42□□□□□ -0.42
SNCA-202ENST00000345009 OBP2AQ9NY56 170 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 STRIP2Q9ULQ0 834 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 NOTCH4Q99466 2003 aa12.42□□□□□ -0.42
SNCA-202ENST00000345009 A0A1W2PQH9 124 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 C2orf78A6NCI8 922 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
SNCA-202ENST00000345009 TLR5O60602 858 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 GLI1P08151 1106 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 CFHP08603 1231 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 MBL2P11226 248 aaPredicted RBP12.41□□□□□ -0.42
SNCA-202ENST00000345009 RARGP13631 454 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 DAOAP59103 153 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 SLC7A9P82251 487 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 TDGQ13569 410 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 HTR4Q13639 388 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 TDRD12Q587J7 1177 aaKnown RBP12.41□□□□□ -0.42
SNCA-202ENST00000345009 C10orf120Q5SQS8 335 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 STXBP5Q5T5C0 1151 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 BSPRYQ5W0U4 402 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
SNCA-202ENST00000345009 WDTC1Q8N5D0 677 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 ARL14EPQ8N8R7 260 aaPredicted RBP12.41□□□□□ -0.42
SNCA-202ENST00000345009 SLC20A1Q8WUM9 679 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 DEPDC1BQ8WUY9 529 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 FAM149B1Q96BN6 582 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 CYP2S1Q96SQ9 504 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 HAUS4Q9H6D7 363 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 NPDC1Q9NQX5 325 aaPredicted RBP12.41□□□□□ -0.42
SNCA-202ENST00000345009 TMEM51Q9NW97 253 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 DNMT3LQ9UJW3 386 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 DOCK8Q8NF50 2099 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 MYO10Q9HD67 2058 aa12.41□□□□□ -0.42
SNCA-202ENST00000345009 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 E5RJQ4 531 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 PIK3R2O00459 728 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 CAPN9O14815 690 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 TADA3O75528 432 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 OAS1P00973 400 aaKnown RBP12.4□□□□□ -0.42
SNCA-202ENST00000345009 LTFP02788 710 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 CYP1A1P04798 512 aaPredicted RBP12.4□□□□□ -0.42
SNCA-202ENST00000345009 CALB1P05937 261 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 PSMC3P17980 439 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 HNRNPH3P31942 346 aaKnown RBP12.4□□□□□ -0.42
SNCA-202ENST00000345009 KPNA1P52294 538 aaPredicted RBP12.4□□□□□ -0.42
SNCA-202ENST00000345009 YWHAZP63104 245 aaKnown RBP12.4□□□□□ -0.42
SNCA-202ENST00000345009 COG7P83436 770 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 FMO1Q01740 532 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 NAA35Q5VZE5 725 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 OR6B2Q6IFH4 312 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 PARM1Q6UWI2 310 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 BEND5Q7L4P6 421 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 MFSD6LQ8IWD5 586 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 UBALD2Q8IYN6 164 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 KIAA1958Q8N8K9 716 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 CPA5Q8WXQ8 436 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 CPXM1Q96SM3 734 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNCA-202ENST00000345009 TRMT61BQ9BVS5 477 aaKnown RBP12.4□□□□□ -0.42
SNCA-202ENST00000345009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNCA-202ENST00000345009 ASNSD1Q9NWL6 643 aa12.4□□□□□ -0.42
SNCA-202ENST00000345009 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms