RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 ENO4A6NNW6 628 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 LAMB3Q13751 1172 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 NCF4Q15080 339 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF618Q5T7W0 954 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CYP4Z1Q86W10 505 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 OLFM3Q96PB7 478 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 NMRK1Q9NWW6 199 aa12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-202ENST00000344404 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SERPINB1P30740 379 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SOX6P35712 828 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CATSPER1Q8NEC5 780 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 RELTQ969Z4 430 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 NARS2Q96I59 477 aaKnown RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CHP1Q99653 195 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 STON1Q9Y6Q2 735 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF24P17028 368 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 ATP6V1B2P21281 511 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SPRP35270 261 aaPredicted RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 C21orf59P57076 290 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 TMEM199Q8N511 208 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 C19orf18Q8NEA5 215 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 GRIN3AQ8TCU5 1115 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PIK3R5Q8WYR1 880 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 NDRG2Q9UN36 371 aaKnown RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 KPNA3O00505 521 aaPredicted RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 LBPP18428 481 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 MAPKAPK2P49137 400 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 NECAB2Q7Z6G3 386 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 MYO1HQ8N1T3 1032 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 GTF3C2Q8WUA4 911 aaPredicted RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 RNFT2Q96EX2 444 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 NLNQ9BYT8 704 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SATB2Q9UPW6 733 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SMIM22K7EJ46 135 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CCDC130P13994 396 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CHN1P15882 459 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 AMD1P17707 334 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CAMK1Q14012 370 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PARGQ86W56 976 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 ZNF786Q8N393 782 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SCAIQ8N9R8 606 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 BLOC1S6Q9UL45 172 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 GPSM3Q9Y4H4 160 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 A0A087WZ62 844 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 IFNA16P05015 189 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 ADCYAP1R1P41586 468 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CCNG1P51959 295 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 GALCP54803 685 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 BACE1P56817 501 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 TGFB2P61812 414 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CYP24A1Q07973 514 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 IKBKEQ14164 716 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PRR23BQ6ZRT6 265 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 KIF2BQ8N4N8 673 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 ADAM32Q8TC27 787 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 FDXACB1Q9BRP7 624 aaPredicted RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SERHL2Q9H4I8 314 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 SERHLQ9NQF3 203 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 LAMC1P11047 1609 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 AP3B1O00203 1094 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 EXTL3O43909 919 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 KRT16P08779 473 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CNPP09543 421 aaKnown RBP12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 FGRP09769 529 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CYP20A1Q6UW02 462 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 OTOP2Q7RTS6 562 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CARD9Q9H257 536 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 PRKAG3Q9UGI9 489 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 ZMYM5Q9UJ78 669 aa12.61□□□□□ -0.39
TRIOBP-202ENST00000344404 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 NR5A2O00482 541 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 IL1R1P14778 569 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 TAF5Q15542 800 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 LPCAT1Q8NF37 534 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 RBBP8Q99708 897 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 OVGP1Q12889 678 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 ARMC4Q5T2S8 1044 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 CDK20Q8IZL9 346 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 PRMT7Q9NVM4 692 aaPredicted RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 ELNP15502 786 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 CBWD3Q5JTY5 395 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 CBWD5Q5RIA9 395 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 SYTL5Q8TDW5 730 aaPredicted RBP12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
TRIOBP-202ENST00000344404 MFSD10Q14728 455 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms