RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 EIF2DP41214 584 aaKnown RBP16.89■□□□□ 0.29
ATG4B-201ENST00000344376 GAD2Q05329 585 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 DPCR1Q3MIW9 517 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 RHBDF2Q6PJF5 856 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 LCLAT1Q6UWP7 414 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 ENOSF1Q7L5Y1 443 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 SCD5Q86SK9 330 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 BBS7Q8IWZ6 715 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 HINFPQ9BQA5 517 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 KRT5P13647 590 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 ERCC5P28715 1186 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-201ENST00000344376 YWHAGP61981 247 aaKnown RBP eCLIP16.88■□□□□ 0.29
ATG4B-201ENST00000344376 PREPLQ4J6C6 727 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-201ENST00000344376 LY6G5CQ5SRR4 150 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 GBP6Q6ZN66 633 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 HTR3DQ70Z44 454 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 MIB1Q86YT6 1006 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 UBA3Q8TBC4 463 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 PNKPQ96T60 521 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 ULBP1Q9BZM6 244 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 EPC1Q9H2F5 836 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 UBE2TQ9NPD8 197 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-201ENST00000344376 RASAL2Q9UJF2 1139 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 NUDT5Q9UKK9 219 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 STRIP2Q9ULQ0 834 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 MYO15AQ9UKN7 3530 aa16.88■□□□□ 0.29
ATG4B-201ENST00000344376 K7ESF4 209 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 M0QYV0 167 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 MDM4O15151 490 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 APODP05090 189 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 HOXA6P31267 233 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 MFAP3P55082 362 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 COG7P83436 770 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 ADIGQ0VDE8 80 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 CNGA2Q16280 664 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 CT47A1Q5JQC4 288 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-201ENST00000344376 PM20D1Q6GTS8 502 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 LONP2Q86WA8 852 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 RPLP0P6Q8NHW5 317 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 KCTD13Q8WZ19 329 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 TFAP2BQ92481 460 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 SECISBP2LQ93073 1101 aaKnown RBP16.87■□□□□ 0.29
ATG4B-201ENST00000344376 MED15Q96RN5 788 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 CRACR2AQ9BSW2 395 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 SPHK2Q9NRA0 654 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 RAB23Q9ULC3 237 aa16.87■□□□□ 0.29
ATG4B-201ENST00000344376 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATG4B-201ENST00000344376 GTPBP10A4D1E9 387 aaKnown RBP16.86■□□□□ 0.29
ATG4B-201ENST00000344376 TULP2O00295 520 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 HOXC11O43248 304 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-201ENST00000344376 BRD2P25440 801 aaKnown RBP16.86■□□□□ 0.29
ATG4B-201ENST00000344376 CNR2P34972 360 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 FNTBP49356 437 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 ZNF132P52740 706 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 EFEMP1Q12805 493 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 EXOC3L4Q17RC7 722 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 GAB4Q2WGN9 574 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 ANO4Q32M45 955 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 HEATR6Q6AI08 1181 aaKnown RBP16.86■□□□□ 0.29
ATG4B-201ENST00000344376 PKN3Q6P5Z2 889 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 TRIM65Q6PJ69 517 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 SUMF1Q8NBK3 374 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 RUBCNQ92622 972 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 KREMEN1Q96MU8 473 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 ARHGEF4Q9NR80 690 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 OLA1Q9NTK5 396 aaKnown RBP16.86■□□□□ 0.29
ATG4B-201ENST00000344376 SMG5Q9UPR3 1016 aaKnown RBP16.86■□□□□ 0.29
ATG4B-201ENST00000344376 ZNF510Q9Y2H8 683 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 USP34Q70CQ2 3546 aa16.86■□□□□ 0.29
ATG4B-201ENST00000344376 RNF225M0QZC1 329 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-201ENST00000344376 GRIA2P42262 883 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 MAN2A1Q16706 1144 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 PKDCCQ504Y2 493 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 NUDT18Q6ZVK8 323 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 IRF2BP1Q8IU81 584 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 RNF139Q8WU17 664 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 WBP2Q969T9 261 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 DCLK3Q9C098 648 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 CNGB3Q9NQW8 809 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 C2orf42Q9NWW7 574 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 MARCH2Q9P0N8 246 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 NCDNQ9UBB6 729 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 CNTN6Q9UQ52 1028 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 DMDP11532 3685 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 MED7O43513 233 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 GREM1O60565 184 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 STC2O76061 302 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 KAT7O95251 611 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 LCP1P13796 627 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-201ENST00000344376 SLC6A11P48066 632 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 SEC13P55735 322 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 KDSRQ06136 332 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 SYT13Q7L8C5 426 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 WDR5BQ86VZ2 330 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 SCML4Q8N228 414 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 CAMKK1Q8N5S9 505 aa16.85■□□□□ 0.29
ATG4B-201ENST00000344376 EZH1Q92800 747 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-201ENST00000344376 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms