RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 CTXN3Q4LDR2 81 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 BOLA3Q53S33 107 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 DCAF6Q58WW2 860 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 C4orf50Q6ZRC1 276 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 BBS12Q6ZW61 710 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 UBE2Q1Q7Z7E8 422 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 CEP57Q86XR8 500 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 SPATA2LQ8IUW3 424 aaPredicted RBP17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 SCML4Q8N228 414 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 CCDC185Q8N715 623 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 EIF1ADQ8N9N8 165 aaKnown RBP17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 SCAMP5Q8TAC9 235 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 RUNDC3BQ96NL0 473 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 TRIM31Q9BZY9 425 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 POPDC2Q9HBU9 364 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 PCDH18Q9HCL0 1135 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 PRDM5Q9NQX1 630 aaPredicted RBP17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 MTMR10Q9NXD2 777 aa17.91■□□□□ 0.46
FRMD4A-202ENST00000342409 ABHD14A-ACY1A0A1B0GW23 586 aa17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 MDM4O15151 490 aa17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 LIASO43766 372 aa17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 RPL21P46778 160 aaKnown RBP17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 RNF168Q8IYW5 571 aaPredicted RBP17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 DCP1BQ8IZD4 617 aaKnown RBP17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 CAVIN3Q969G5 261 aa17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 GRHL1Q9NZI5 618 aa17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 DNPEPQ9ULA0 475 aa17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 UTP11Q9Y3A2 253 aaKnown RBP17.9■□□□□ 0.46
FRMD4A-202ENST00000342409 CST8O60676 142 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 LTFP02788 710 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 GPR15P49685 360 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 PGFP49763 221 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 DRG2P55039 364 aaKnown RBP17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 WDR5P61964 334 aaKnown RBP17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 ODF2Q5BJF6 829 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 MFSD5Q6N075 450 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 DRICH1Q6PGQ1 229 aaPredicted RBP17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 ZDHHC24Q6UX98 284 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 TTC9BQ8N6N2 239 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 SLC35B2Q8TB61 432 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 IRGQQ8WZA9 623 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 HAUS1Q96CS2 278 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 NCAPGQ9BPX3 1015 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 RAB17Q9H0T7 212 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 HOMER3Q9NSC5 361 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 ZDHHC18Q9NUE0 388 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 SAE1Q9UBE0 346 aaPredicted RBP17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 SNX24Q9Y343 169 aa17.89■□□□□ 0.46
FRMD4A-202ENST00000342409 OR6C75A6NL08 312 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 ECEL1O95672 775 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 ACRP10323 421 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 IVDP26440 423 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 L1CAMP32004 1257 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 DYNLT1P63172 113 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 KRT17Q04695 432 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 OASLQ15646 514 aaKnown RBP17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 ERMARDQ5T6L9 678 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 ZNF280DQ6N043 979 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 EMBQ6PCB8 327 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 HDXQ7Z353 690 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 TSEN2Q8NCE0 465 aaKnown RBP17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 STKLD1Q8NE28 680 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 ATL2Q8NHH9 583 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 FUBP3Q96I24 572 aaKnown RBP eCLIP17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 KCTD15Q96SI1 283 aaPredicted RBP17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 TMEM106CQ9BVX2 250 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 CALN1Q9BXU9 219 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 TMPRSS4Q9NRS4 437 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 FAM114A2Q9NRY5 505 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 PIGVQ9NUD9 493 aa17.89■□□□□ 0.45
FRMD4A-202ENST00000342409 TP73O15350 636 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 RAG1P15918 1043 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 PECAM1P16284 738 aaPredicted RBP17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 GRIK1P39086 918 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 SLC5A3P53794 718 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 ELAVL2Q12926 359 aaKnown RBP17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 PTK6Q13882 451 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 PDK2Q15119 407 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 DPYSL2Q16555 572 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 NFE2Q16621 373 aaPredicted RBP17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 SDHAF4Q5VUM1 108 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 PRSS55Q6UWB4 352 aaPredicted RBP17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 PQLC3Q8N755 202 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 ATAD1Q8NBU5 361 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 NKD2Q969F2 451 aaPredicted RBP17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 FAF2Q96CS3 445 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 PGLYRP2Q96PD5 576 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 RNF157Q96PX1 679 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 CRISPLD1Q9H336 500 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 WDR6Q9NNW5 1121 aaKnown RBP17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 RASAL2Q9UJF2 1139 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 NUP205Q92621 2012 aa17.88■□□□□ 0.45
FRMD4A-202ENST00000342409 LAMA2P24043 3122 aaKnown RBP17.87■□□□□ 0.45
FRMD4A-202ENST00000342409 PLXNA4Q9HCM2 1894 aa17.87■□□□□ 0.45
FRMD4A-202ENST00000342409 I6L893 689 aaPredicted RBP17.87■□□□□ 0.45
FRMD4A-202ENST00000342409 M0QYT0 321 aa17.87■□□□□ 0.45
FRMD4A-202ENST00000342409 AMHP03971 560 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms