RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CHRNB1P11230 501 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 HSPA6P17066 643 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 FDFT1P37268 417 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 SLC5A3P53794 718 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 NR1H2P55055 460 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 SP4Q02446 784 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 VGLL4Q14135 290 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 RASA2Q15283 850 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 MAPK6Q16659 721 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 C6orf163Q5TEZ5 329 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 PPP1R2P3Q6NXS1 205 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 AAGABQ6PD74 315 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CCDC137Q6PK04 289 aaKnown RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 TMPRSS6Q8IU80 811 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 FAM178BQ8IXR5 827 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 ZC3H3Q8IXZ2 948 aaKnown RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 CHPT1Q8WUD6 406 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 PRPF18Q99633 342 aaKnown RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 TYW1Q9NV66 732 aaKnown RBP12.31□□□□□ -0.44
RTN3-203ENST00000341307 ANKFY1Q9P2R3 1169 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 KLHL3Q9UH77 587 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 AFG3L2Q9Y4W6 797 aa12.31□□□□□ -0.44
RTN3-203ENST00000341307 PHIPQ8WWQ0 1821 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 PFDN6O15212 129 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TEX28O15482 410 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 PRPF4O43172 522 aaKnown RBP eCLIP12.3□□□□□ -0.443e-8■□□□□ 10.6
RTN3-203ENST00000341307 CALUO43852 315 aaPredicted RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 DNAJA2O60884 412 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 CTNNA2P26232 953 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 HOXA7P31268 230 aaPredicted RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 RPA3P35244 121 aaPredicted RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 MXI1P50539 228 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 MARSP56192 900 aaKnown RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 ATP1A4Q13733 1029 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 PSMD6Q15008 389 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TMED2Q15363 201 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TREML2Q5T2D2 321 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 PLA2G4FQ68DD2 849 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 CCSAPQ6IQ19 270 aaPredicted RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 RHBDF2Q6PJF5 856 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TRABD2AQ86V40 505 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 AHI1Q8N157 1196 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 DDI1Q8WTU0 396 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TMIGD2Q96BF3 282 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 PLEKHA8Q96JA3 519 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 RANBP9Q96S59 729 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 KCNK13Q9HB14 408 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 GID8Q9NWU2 228 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TISP43B9A030 160 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 CYP26A1O43174 497 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 SLC9A1P19634 815 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 CDK16Q00536 496 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 CREB5Q02930 508 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 SEPT6Q14141 434 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 BMT2Q1RMZ1 405 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 WDR45BQ5MNZ6 344 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 ZNF720Q7Z2F6 126 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 FAM20CQ8IXL6 584 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 ESX1Q8N693 406 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 POU5F2Q8N7G0 328 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 POP1Q99575 1024 aaKnown RBP12.3□□□□□ -0.44
RTN3-203ENST00000341307 THTPAQ9BU02 230 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 GPRC5CQ9NQ84 441 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 NINJ2Q9NZG7 142 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 ARMCX1Q9P291 453 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 PTPN22Q9Y2R2 807 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
RTN3-203ENST00000341307 TNFAIP8O95379 198 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 ZBTB11O95625 1053 aaPredicted RBP12.29□□□□□ -0.44
RTN3-203ENST00000341307 NR3C2P08235 984 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 GAP43P17677 238 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 PIK3CAP42336 1068 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 RARRES1P49788 294 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 IYDQ6PHW0 289 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
RTN3-203ENST00000341307 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 ICA1LQ8NDH6 482 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 GSTCDQ8NEC7 633 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 C12orf42Q96LP6 360 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 TTC25Q96NG3 672 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 PAIP1Q9H074 479 aaKnown RBP12.29□□□□□ -0.44
RTN3-203ENST00000341307 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 CAPN8A6NHC0 703 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 C19orf81C9J6K1 198 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 RGS20O76081 388 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 H2AFZP0C0S5 128 aa12.29□□□□□ -0.44
RTN3-203ENST00000341307 YWHABP31946 246 aaKnown RBP12.29□□□□□ -0.44
RTN3-203ENST00000341307 QARSP47897 775 aaKnown RBP12.29□□□□□ -0.44
RTN3-203ENST00000341307 PPATQ06203 517 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms