RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 NME3Q13232 169 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
CLDN4-201ENST00000340958 VPS52Q8N1B4 723 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 NUP93Q8N1F7 819 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 CCDC26Q8TAB7 109 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 SLC7A14Q8TBB6 771 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 RAPGEF5Q92565 580 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 TBCBQ99426 244 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 LRRC1Q9BTT6 524 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 HERC2P3Q9BVR0 1158 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 DDX47Q9H0S4 455 aaKnown RBP18.1■□□□□ 0.49
CLDN4-201ENST00000340958 CHST7Q9NS84 486 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.1■□□□□ 0.49
CLDN4-201ENST00000340958 VWA8A3KMH1 1905 aa18.1■□□□□ 0.49
CLDN4-201ENST00000340958 M0QYT0 321 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TBC1D4O60343 1298 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RARAP10276 462 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RPL10AP62906 217 aaKnown RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MRPS25P82663 173 aaKnown RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 DUSP4Q13115 394 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RAB30Q15771 203 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 GLE1Q53GS7 698 aaKnown RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RAB6CQ53S08 254 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 BOLA3Q53S33 107 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TFDP3Q5H9I0 405 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 PM20D1Q6GTS8 502 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 SPOCD1Q6ZMY3 1216 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MAP7D3Q8IWC1 876 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 EDEM1Q92611 657 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TIFAQ96CG3 184 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 SLC2A13Q96QE2 648 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RAD9AQ99638 391 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 CALN1Q9BXU9 219 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MAK16Q9BXY0 300 aaKnown RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RAB6CQ9H0N0 254 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 FBXO44Q9H4M3 255 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 ARGLU1Q9NWB6 273 aaPredicted RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 STK39Q9UEW8 545 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MSRAQ9UJ68 235 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 PCDHA11Q9Y5I1 949 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MYO9BQ13459 2157 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 SOAT2O75908 522 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TJP3O95049 919 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TFE3P19532 575 aaPredicted RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 CDH6P55285 790 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 HDAC4P56524 1084 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 HTRA4P83105 476 aaPredicted RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 ROR1Q01973 937 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 DSG1Q02413 1049 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 DEUP1Q05D60 604 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 BSPRYQ5W0U4 402 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 BTBD8Q5XKL5 378 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 SLC8B1Q6J4K2 584 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MFSD7Q6UXD7 560 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 STRADAQ7RTN6 431 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 RNF168Q8IYW5 571 aaPredicted RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TTC9BQ8N6N2 239 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 GPR152Q8TDT2 470 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MAGOHBQ96A72 148 aaKnown RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 FAM161BQ96MY7 647 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 PEBP4Q96S96 227 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 PARD6BQ9BYG5 372 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 NKX2-4Q9H2Z4 354 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 TTYH1Q9H313 450 aaPredicted RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 FAM204AQ9H8W3 233 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 ANKZF1Q9H8Y5 726 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 MRPL17Q9NRX2 175 aaKnown RBP18.09■□□□□ 0.49
CLDN4-201ENST00000340958 USP3Q9Y6I4 520 aa18.09■□□□□ 0.49
CLDN4-201ENST00000340958 COL4A6Q14031 1691 aa18.08■□□□□ 0.49
CLDN4-201ENST00000340958 TCRBV7S2A1N4TA0A589 114 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 FSCN2O14926 492 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 FGF18O76093 207 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 KRT10P13645 584 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 KDELR1P24390 212 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 MCM3P25205 808 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 RDXP35241 583 aaKnown RBP18.08■□□□□ 0.48
CLDN4-201ENST00000340958 YWHAGP61981 247 aaKnown RBP eCLIP18.08■□□□□ 0.48
CLDN4-201ENST00000340958 SLC7A5Q01650 507 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 ZNF697Q5TEC3 545 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 SYPL2Q5VXT5 272 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.481e-8■■■■■ 42.2
CLDN4-201ENST00000340958 SCML4Q8N228 414 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 DEFB123Q8N688 67 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 PLEKHA4Q9H4M7 779 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 RRN3Q9NYV6 651 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 NR2E1Q9Y466 385 aa18.08■□□□□ 0.48
CLDN4-201ENST00000340958 WDR27A2RRH5 827 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 TNFRSF10BO14763 440 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 ADAM12O43184 909 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 EFEMP2O95967 443 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 CA3P07451 260 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 HAPLN1P10915 354 aaPredicted RBP18.07■□□□□ 0.48
CLDN4-201ENST00000340958 ATXN1P54253 815 aaKnown RBP18.07■□□□□ 0.48
CLDN4-201ENST00000340958 ERMARDQ5T6L9 678 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 DENND5BQ6ZUT9 1274 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 MAATS1Q7Z4T9 603 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 STKLD1Q8NE28 680 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 ADAM32Q8TC27 787 aa18.07■□□□□ 0.48
CLDN4-201ENST00000340958 CENPIQ92674 756 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms