RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 HOXC6P09630 235 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 ABCG1P45844 678 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 GMPSP49915 693 aaPredicted RBP14.95□□□□□ -0.02
CPSF7-201ENST00000340437 YWHAZP63104 245 aaKnown RBP14.95□□□□□ -0.02
CPSF7-201ENST00000340437 ANGEL2Q5VTE6 544 aaKnown RBP14.95□□□□□ -0.02
CPSF7-201ENST00000340437 FKBP1CQ5VVH2 108 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 FAM160B1Q5W0V3 765 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 XRRA1Q6P2D8 792 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 HACE1Q8IYU2 909 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 MZB1Q8WU39 189 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF333Q96JL9 665 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF518BQ9C0D4 1074 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 MINDY3Q9H8M7 445 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 SMYD2Q9NRG4 433 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 MYO18AQ92614 2054 aaKnown RBP14.95□□□□□ -0.02
CPSF7-201ENST00000340437 DCAF8L1A6NGE4 600 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 PDE5AO76074 875 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 CSH1P0DML2 217 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 CSH2P0DML3 217 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 GPD1P21695 349 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 LGSNQ5TDP6 509 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 JADE1Q6IE81 842 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 PPP1R2P3Q6NXS1 205 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 CCNJLQ8IV13 435 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 PGAP2Q9UHJ9 254 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 CCDC78A2IDD5 438 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 MRPS35P82673 323 aaKnown RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 SARNPP82979 210 aaKnown RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 SLC4A11Q8NBS3 891 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF483Q8TF39 744 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 PYDC1Q8WXC3 89 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 C20orf27Q9GZN8 174 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 XYLT2Q9H1B5 865 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 CNTN6Q9UQ52 1028 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 LTBP4Q8N2S1 1624 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 SAT1P21673 171 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 IZUMO2Q6UXV1 221 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 FAM183BPQ6ZVS7 135 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 SCUBE1Q8IWY4 988 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 C1orf127Q8N9H9 656 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 TMEM176AQ96HP8 235 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 KLC2Q9H0B6 622 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 C2CD2Q9Y426 696 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 SORBS2O94875 1100 aaKnown RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 NDST1P52848 882 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 CACNA2D1P54289 1103 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 PDE1BQ01064 536 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 STX3Q13277 289 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 GJC2Q5T442 439 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 EFCAB12Q6NXP0 572 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 RIPOR1Q6ZS17 1223 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 ARHGAP24Q8N264 748 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 FAM172AQ8WUF8 416 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 SEPT1Q8WYJ6 367 aa14.94□□□□□ -0.02
CPSF7-201ENST00000340437 CPSF3Q9UKF6 684 aaKnown RBP14.94□□□□□ -0.02
CPSF7-201ENST00000340437 APOL1O14791 398 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 C6orf222P0C671 652 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 SP100P23497 879 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 TFDP2Q14188 446 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 MAP1SQ66K74 1059 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 ATG16L1Q676U5 607 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 DENND5BQ6ZUT9 1274 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 ACOT1Q86TX2 421 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 GSTCDQ8NEC7 633 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 SLC26A7Q8TE54 656 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 SKA1Q96BD8 255 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 MTBPQ96DY7 904 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 LNPEPQ9UIQ6 1025 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 TEX264Q9Y6I9 313 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 PPP1R12AO14974 1030 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 PLSCR1O15162 318 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 FARP2O94887 1054 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 TFE3P19532 575 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 STIP1P31948 543 aaKnown RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 GTF2A2P52657 109 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 SLC18A1P54219 525 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 EML3Q32P44 896 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 RASIP1Q5U651 963 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 MAP7D3Q8IWC1 876 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 ENDOVQ8N8Q3 282 aaKnown RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 CLMNQ96JQ2 1002 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 GBP5Q96PP8 586 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 TSPAN16Q9UKR8 245 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 AKT3Q9Y243 479 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 NFASCO94856 1347 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 THSD7AQ9UPZ6 1657 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 SPDYE16A6NNV3 312 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 AP1G2O75843 785 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 ETV4P43268 484 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 EFNA5P52803 228 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 VWA5B1Q5TIE3 1220 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 CES4AQ5XG92 561 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 CDCA2Q69YH5 1023 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-201ENST00000340437 MPZL3Q6UWV2 235 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 UNC5AQ6ZN44 842 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 KBTBD2Q8IY47 623 aa14.93□□□□□ -0.02
CPSF7-201ENST00000340437 PLD5Q8N7P1 536 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms