RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 KRIT1O00522 736 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 ENC1O14682 589 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 B4GALT3O60512 393 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 APOC2P02655 101 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 URODP06132 367 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 TSHRP16473 764 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 AFF1P51825 1210 aaKnown RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 ATN1P54259 1190 aaPredicted RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 TNK2Q07912 1038 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 FAM171A1Q5VUB5 890 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 C8orf74Q6P047 294 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■■■■□ 20.5
NUP43-201ENST00000340413 CYP4V2Q6ZWL3 525 aaPredicted RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 PCGF5Q86SE9 256 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CROCCP2Q86T23 111 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 RELL1Q8IUW5 271 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 LZTR1Q8N653 840 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 JOSD2Q8TAC2 188 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 NGRNQ9NPE2 291 aaKnown RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 WHRNQ9P202 907 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PPARGC1AQ9UBK2 798 aaKnown RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 DNAJB4Q9UDY4 337 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PCDHA11Q9Y5I1 949 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 H3BRJ5 948 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 FGF10O15520 208 aaPredicted RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 NCK2O43639 380 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 IGLV3-27P01718 113 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 KRT1P04264 644 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 RALAP11233 206 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 MIPP30301 263 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 BMP8BP34820 402 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 RPL7AP62424 266 aaKnown RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 ADIGQ0VDE8 80 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 SEMA3BQ13214 749 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 HERC6Q8IVU3 1022 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ATL2Q8NHH9 583 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 PAAF1Q9BRP4 392 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 DCLK3Q9C098 648 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 TLR8Q9NR97 1041 aaKnown RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 FBXW11Q9UKB1 542 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 MTSS1O43312 755 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ATMINO43313 823 aaPredicted RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 PYGMP11217 842 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 L1CAMP32004 1257 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 COILP38432 576 aaPredicted RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 TAS2R40P59535 323 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 BTG3Q14201 252 aaPredicted RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 PAFAH1B3Q15102 231 aaKnown RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 CYP4A22Q5TCH4 519 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ZNF461Q8TAF7 563 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 CDCA3Q99618 268 aaPredicted RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 EMILIN2Q9BXX0 1053 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ANKZF1Q9H8Y5 726 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 TLR6Q9Y2C9 796 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 MRPL42Q9Y6G3 142 aaKnown RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 GAS8O95995 478 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 FGGP02679 453 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ATF2P15336 505 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 CSF2RAP15509 400 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 STIP1P31948 543 aaKnown RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 EPHB4P54760 987 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 YWHAGP61981 247 aaKnown RBP eCLIP7.48□□□□□ -1.21
NUP43-201ENST00000340413 SMC1AQ14683 1233 aaKnown RBP7.48□□□□□ -1.21
NUP43-201ENST00000340413 SLC14A2Q15849 920 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ARFGAP1Q8N6T3 406 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 FBXO22Q8NEZ5 403 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 SLC35B2Q8TB61 432 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 FAM172AQ8WUF8 416 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 PLD4Q96BZ4 506 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 GPR62Q9BZJ7 368 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 ULBP1Q9BZM6 244 aa7.48□□□□□ -1.21
NUP43-201ENST00000340413 DENND4CQ5VZ89 1909 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 BCLAF3A2AJT9 711 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 EIF3HO15372 352 aaKnown RBP eCLIP7.47□□□□□ -1.21
NUP43-201ENST00000340413 HNRNPA1P09651 372 aaKnown RBP eCLIP7.47□□□□□ -1.21
NUP43-201ENST00000340413 PTGIRP43119 386 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 MAGEA6P43360 314 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 HDAC4P56524 1084 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 MAP3K7CLP57077 242 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 TRIP4Q15650 581 aaPredicted RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 PTPROQ16827 1216 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 TTC39BQ5VTQ0 682 aaPredicted RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 LRRTM3Q86VH5 581 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 HOOK3Q86VS8 718 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 KRT35Q92764 455 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 FERMT1Q9BQL6 677 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.215e-15■■■■■ 83.3
NUP43-201ENST00000340413 MRPL17Q9NRX2 175 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 ZNF510Q9Y2H8 683 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 NEU2Q9Y3R4 380 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 NR2E3Q9Y5X4 410 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 SLC4A7Q9Y6M7 1214 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 SULT1E1P49888 294 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 SLC5A3P53794 718 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 ILF2Q12905 390 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 PABPC1LQ4VXU2 614 aaKnown RBP7.47□□□□□ -1.21
NUP43-201ENST00000340413 SLC39A12Q504Y0 691 aa7.47□□□□□ -1.21
NUP43-201ENST00000340413 ODF2Q5BJF6 829 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms