RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CDK5RAP1Q96SZ6 601 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-202ENST00000339255 CDCA3Q99618 268 aaPredicted RBP15.2■□□□□ 0.02
NIPAL3-202ENST00000339255 GOLPH3Q9H4A6 298 aa15.2■□□□□ 0.02
NIPAL3-202ENST00000339255 CCDC66A2RUB6 948 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CLASP2O75122 1294 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CSPG5O95196 566 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CTNNA1P35221 906 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 PCK1P35558 622 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 USP46P62068 366 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 RPS6KA1Q15418 735 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 LRRC38Q5VT99 294 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 TRNP1Q6NT89 227 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 STRADAQ7RTN6 431 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 GIPC2Q8TF65 315 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 HES6Q96HZ4 224 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CFAP57Q96MR6 1250 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 TLR10Q9BXR5 811 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 PSTPIP1O43586 416 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 POU2F2P09086 479 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 HNRNPA1P09651 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 SPATA31D3P0C874 917 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 NCAM1P13591 858 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 HMGA1P17096 107 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 TAF10Q12962 218 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CCDC14Q49A88 953 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 PPM1LQ5SGD2 360 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 PAPD7Q5XG87 772 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 BTBD8Q5XKL5 378 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 SPATA31D4Q6ZUB0 917 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 HFE2Q6ZVN8 426 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 POLNQ7Z5Q5 900 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 TADA2BQ86TJ2 420 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 DEFB106AQ8N104 65 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 SLC22A17Q8WUG5 538 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 NDRG1Q92597 394 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 ZNF592Q92610 1267 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CENPIQ92674 756 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 CD101Q93033 1021 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 NPY6RQ99463 290 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 ZNF576Q9H609 170 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 TLE6Q9H808 572 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 MAN1C1Q9NR34 630 aa15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 OLA1Q9NTK5 396 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 MAGED2Q9UNF1 606 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-202ENST00000339255 EPOPA6NHQ4 379 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ENC1O14682 589 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 LRCH4O75427 683 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ZMYND10O75800 440 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 F9P00740 461 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ATP1A1P05023 1023 aaKnown RBP15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 FYNP06241 537 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ZDHHC11BP0C7U3 371 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 RALAP11233 206 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 PRLRP16471 622 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 CTNNA2P26232 953 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 TUBP50607 506 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 MTMR3Q13615 1198 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 TUBB2AQ13885 445 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 SNX30Q5VWJ9 437 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 SCD5Q86SK9 330 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 RHOT1Q8IXI2 618 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 STKLD1Q8NE28 680 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 RNF139Q8WU17 664 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 FAM172AQ8WUF8 416 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 PGAP3Q96FM1 320 aaPredicted RBP15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ZNF512Q96ME7 567 aaPredicted RBP15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 TUBB2BQ9BVA1 445 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 ZDHHC7Q9NXF8 308 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 GMIPQ9P107 970 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 HYOU1Q9Y4L1 999 aa15.18■□□□□ 0.02
NIPAL3-202ENST00000339255 A0A1W2PQH9 124 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 FANCGO15287 622 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 KRT7P08729 469 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 ATP11AP98196 1134 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 DUSP6Q16828 381 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 PABPC1LQ4VXU2 614 aaKnown RBP15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 CC2D1AQ6P1N0 951 aaPredicted RBP15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 MSANTD2Q6P1R3 559 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 TBCBQ99426 244 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 SMOC2Q9H3U7 446 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 LMCD1Q9NZU5 365 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 SNX12Q9UMY4 172 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 NAALADL1Q9UQQ1 740 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 USTQ9Y2C2 406 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 PCDHA3Q9Y5H8 950 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 HCFC2Q9Y5Z7 792 aa15.17■□□□□ 0.02
NIPAL3-202ENST00000339255 CES2O00748 559 aa15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 PRPSAP2O60256 369 aa15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 XYLBO75191 536 aa15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 ENDOD1O94919 500 aa15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 FGF19O95750 216 aa15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 GBP1P32455 592 aa15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
NIPAL3-202ENST00000339255 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms