RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 P4HA2O15460 535 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 CBFA2T3O75081 653 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 MYH6P13533 1939 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 ABCG1P45844 678 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 PSMC5P62195 406 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 DLG1Q12959 904 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 TAF5Q15542 800 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 RNF19BQ6ZMZ0 732 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 FBXW8Q8N3Y1 598 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 PTTG2Q9NZH5 202 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 PAK5Q9P286 719 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 SLC7A8Q9UHI5 535 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 CYB561D2O14569 222 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 APOL1O14791 398 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 CLOCKO15516 846 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 SH3BP5O60239 455 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 CCDC166P0CW27 439 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 USP10Q14694 798 aaKnown RBP13.69□□□□□ -0.22
COL2A1-201ENST00000337299 CLEC16AQ2KHT3 1053 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 LDLRAP1Q5SW96 308 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 CIAPIN1Q6FI81 312 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 HAS1Q92839 578 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 PIF1Q9H611 641 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 KCNQ5Q9NR82 932 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 GPATCH2LQ9NWQ4 482 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 LNPEPQ9UIQ6 1025 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 COL5A2P05997 1499 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 ASTN1O14525 1302 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 FSCN2O14926 492 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 SRP72O76094 671 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 ME2P23368 584 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 NLRP11P59045 1033 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PLIN5Q00G26 463 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 NADK2Q4G0N4 442 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM63BQ5T3F8 832 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PQLC1Q8N2U9 271 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PIWIL2Q8TC59 973 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF669Q96BR6 464 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 MRPS26Q9BYN8 205 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 F8VP50 259 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 TAF4O00268 1085 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 TBXAS1P24557 533 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 FSTL1Q12841 308 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 TRIM60Q495X7 471 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 EGFLAMQ63HQ2 1017 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 RTKN2Q8IZC4 609 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 GLMNQ92990 594 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 AGBL1Q96MI9 1066 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 EIF2AQ9BY44 585 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 GNEQ9Y223 722 aaKnown RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 CSADQ9Y600 493 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 CPA3P15088 417 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 SLC5A3P53794 718 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 SPDYAQ5MJ70 313 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PRAMEF18Q5VWM3 479 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-201ENST00000337299 HPS1Q92902 700 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 PCDHB18PQ96TA0 734 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 COQ7Q99807 217 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 GABBR1Q9UBS5 961 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 POLLQ9UGP5 575 aa13.68□□□□□ -0.22
COL2A1-201ENST00000337299 MYOCOSA0A1B0GUC4 107 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF839A8K0R7 811 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 MAGEB3O15480 346 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 GLRA3O75311 464 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 NFKBIAP25963 317 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 TRIM25Q14258 630 aaKnown RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 CCDC85BQ15834 202 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 EMC10Q5UCC4 262 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 MYO1HQ8N1T3 1032 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 DLG5Q8TDM6 1919 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 KPNA4O00629 521 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 FAM155BO75949 473 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 UBE3AQ05086 875 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 INAQ16352 499 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 RSBN1Q5VWQ0 802 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 GADL1Q6ZQY3 521 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 FASTKD5Q7L8L6 764 aaKnown RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 MTG1Q9BT17 334 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 DGCR6LQ9BY27 220 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 GCOM2Q9BZD3 368 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-201ENST00000337299 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 A0A087WXM4 84 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 ASLP04424 464 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
COL2A1-201ENST00000337299 CES3Q6UWW8 571 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms