RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 CASKIN2Q8WXE0 1202 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 KIFC1Q9BW19 673 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 STK39Q9UEW8 545 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 CNOT7Q9UIV1 285 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 GPC1P35052 558 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 KCNJ1P48048 391 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 L2HGDHQ9H9P8 463 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 KLHL28Q9NXS3 571 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 AHSPQ9NZD4 102 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 TRIM10Q9UDY6 481 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ACOT9Q9Y305 439 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 CFAP65Q6ZU64 1925 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 SLC26A2P50443 739 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 OXCT1P55809 520 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 CYP4A22Q5TCH4 519 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 MYCBPAPQ8TBZ2 947 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 KCNB2Q92953 911 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 CGRRF1Q99675 332 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 NOL6Q9H6R4 1146 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 C17orf102A2RUQ5 167 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 RGS20O76081 388 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ITGB3P05106 788 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 CTSHP09668 335 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 TPBGLP0DKB5 382 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 HOXB8P17481 243 aaPredicted RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 PTPN4P29074 926 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ATP1A4Q13733 1029 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 SMTNL2Q2TAL5 461 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 PDZK1Q5T2W1 519 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 NAIF1Q69YI7 327 aaPredicted RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ADGRE3Q9BY15 652 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 TMEM114B3SHH9 223 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 VPS4BO75351 444 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ASS1P00966 412 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 DNAJB2P25686 324 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 MAGEA10P43363 369 aaPredicted RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 SEC24CP53992 1094 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 PAPD7Q5XG87 772 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 DPP10Q8N608 796 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 RPRD1AQ96P16 312 aaPredicted RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 KCTD10Q9H3F6 313 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 AVENQ9NQS1 362 aaPredicted RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 MGAT4DA6NG13 374 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 PMPCBO75439 489 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 MFN2O95140 757 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 EPB42P16452 691 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 TARSP26639 723 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 RENBPP51606 427 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 NAB1Q13506 487 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 WASHC2DQ5SRD0 308 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 CD248Q9HCU0 757 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 HPS4Q9NQG7 708 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 PDGFCQ9NRA1 345 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 ALDH6A1Q02252 535 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 MPZL3Q6UWV2 235 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 OTOAQ7RTW8 1153 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
HLCS-201ENST00000336648 TARS2Q9BW92 718 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 ZMYM2Q9UBW7 1377 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 FAM205CA6NFA0 338 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 H3BMM5 538 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 TAF4O00268 1085 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 AKAP5P24588 427 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 PPP2R1BP30154 601 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 FLT3P36888 993 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 CDC16Q13042 620 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 NFIL3Q16649 462 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 C10orf53Q8N6V4 93 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 NOA1Q8NC60 698 aaKnown RBP13.46□□□□□ -0.25
HLCS-201ENST00000336648 MIEF2Q96C03 454 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
HLCS-201ENST00000336648 ICAM1P05362 532 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 HOXC6P09630 235 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 PON1P27169 355 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 LHX1P48742 406 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 TAB1Q15750 504 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 CCDC153Q494R4 210 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 C11orf63Q6NUN7 778 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 CDK20Q8IZL9 346 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 BLOC1S5Q8TDH9 187 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.26
HLCS-201ENST00000336648 STARD8Q92502 1023 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 PPP1R10Q96QC0 940 aaKnown RBP13.46□□□□□ -0.26
HLCS-201ENST00000336648 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms