RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TROVE2P10155 538 aaKnown RBP eCLIP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 ALADP13716 330 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 SNX16P57768 344 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 OVGP1Q12889 678 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 SLC9A4Q6AI14 798 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 SLC27A1Q6PCB7 646 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 APBB1IPQ7Z5R6 666 aaPredicted RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 TMEM110Q86TL2 294 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 AGGF1Q8N302 714 aaeCLIP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 BEST2Q8NFU1 509 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 OR6J1Q8NGC5 347 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 GTF3C2Q8WUA4 911 aaPredicted RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 SLC10A4Q96EP9 437 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 APOPT1Q96IL0 206 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 TMEM237Q96Q45 408 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 ZNF670Q9BS34 389 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 ZC3H7BQ9UGR2 993 aaKnown RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 PDHXO00330 501 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 MDM4O15151 490 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 SNAI1O95863 264 aaPredicted RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 NEFHP12036 1026 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 SMPD1P17405 629 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 ADORA2BP29275 332 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 ZNF449Q6P9G9 518 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 DPP9Q86TI2 863 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 PRPF39Q86UA1 669 aaKnown RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 PPM1NQ8N819 430 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 CLEC4CQ8WTT0 213 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 KHSRPQ92945 711 aaKnown RBP eCLIP18.4■□□□□ 0.548e-8■■■□□ 17.5
LRCH3-201ENST00000334859 RTP4Q96DX8 246 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 TRIM6Q9C030 488 aaPredicted RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 DHX35Q9H5Z1 703 aaKnown RBP18.4■□□□□ 0.54
LRCH3-201ENST00000334859 PLEKHA5Q9HAU0 1116 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 ETNK2Q9NVF9 386 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 DCTN4Q9UJW0 460 aa18.4■□□□□ 0.54
LRCH3-201ENST00000334859 BCLAF3A2AJT9 711 aaKnown RBP18.39■□□□□ 0.54
LRCH3-201ENST00000334859 A6NJR5 290 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 PYGBP11216 843 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 CCDC130P13994 396 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 CYP2F1P24903 491 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 HOXA11P31270 313 aaPredicted RBP18.39■□□□□ 0.54
LRCH3-201ENST00000334859 EPHX2P34913 555 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 WLSQ5T9L3 541 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 NLRP9Q7RTR0 991 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 CCDC33Q8N5R6 958 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 FAM111AQ96PZ2 611 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.54
LRCH3-201ENST00000334859 NXF3Q9H4D5 531 aaKnown RBP18.39■□□□□ 0.54
LRCH3-201ENST00000334859 NRDE2Q9H7Z3 1164 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 MANSC1Q9H8J5 431 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 HAO1Q9UJM8 370 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 DERAQ9Y315 318 aa18.39■□□□□ 0.54
LRCH3-201ENST00000334859 GABBR2O75899 941 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 FAM155BO75949 473 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 PDGFRBP09619 1106 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
LRCH3-201ENST00000334859 DGKDQ16760 1214 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 RALGAPA2Q2PPJ7 1873 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 USP50Q70EL3 339 aaPredicted RBP18.39■□□□□ 0.53
LRCH3-201ENST00000334859 CDKL3Q8IVW4 592 aaPredicted RBP18.39■□□□□ 0.53
LRCH3-201ENST00000334859 AGAP11Q8TF27 550 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 USP6NLQ92738 828 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 PTPRN2Q92932 1015 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 TTC17Q96AE7 1141 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 RAB3IPQ96QF0 476 aaPredicted RBP18.39■□□□□ 0.53
LRCH3-201ENST00000334859 OSMRQ99650 979 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 FRMD8Q9BZ67 464 aaPredicted RBP18.39■□□□□ 0.53
LRCH3-201ENST00000334859 VPS11Q9H270 941 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF408Q9H9D4 720 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 TTLL3Q9Y4R7 772 aa18.39■□□□□ 0.53
LRCH3-201ENST00000334859 LCP1P13796 627 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 GBE1Q04446 702 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 SOWAHAQ2M3V2 549 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 NOTUMQ6P988 496 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 SLC26A11Q86WA9 606 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 LRRC52Q8N7C0 313 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 IQCGQ9H095 443 aaKnown RBP18.38■□□□□ 0.53
LRCH3-201ENST00000334859 LRMDAQ9H2I8 198 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 POPDC2Q9HBU9 364 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 L3MBTL1Q9Y468 752 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 ATP5HO75947 161 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 RECQL4O94761 1208 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 DUSP28Q4G0W2 176 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 C9orf57Q5W0N0 161 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 CAND1Q86VP6 1230 aaKnown RBP18.38■□□□□ 0.53
LRCH3-201ENST00000334859 LRRC6Q86X45 466 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 ZDHHC17Q8IUH5 632 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 VPS52Q8N1B4 723 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 ZNF276Q8N554 614 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 NCAPGQ9BPX3 1015 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 TSSK1BQ9BXA7 367 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 CYLDQ9NQC7 956 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 AP4E1Q9UPM8 1137 aa18.38■□□□□ 0.53
LRCH3-201ENST00000334859 A0A0G2JND7 137 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 TRIM49D1C9J1S8 452 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 AKAP5P24588 427 aa18.37■□□□□ 0.53
LRCH3-201ENST00000334859 MAP2K2P36507 400 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms