RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ZNF280DQ6N043 979 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 IFNLR1Q8IU57 520 aaPredicted RBP16.54■□□□□ 0.24
PDGFB-201ENST00000331163 ANKRD52Q8NB46 1076 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 P3H4Q92791 437 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 SPON2Q9BUD6 331 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 UPF3AQ9H1J1 476 aaKnown RBP16.54■□□□□ 0.24
PDGFB-201ENST00000331163 IGFLR1Q9H665 355 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 TBK1Q9UHD2 729 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 TLL1O43897 1013 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 GPS1Q13098 491 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 SYPL2Q5VXT5 272 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 XYLT1Q86Y38 959 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 NT5DC4Q86YG4 428 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 SLC13A5Q86YT5 568 aaPredicted RBP16.54■□□□□ 0.24
PDGFB-201ENST00000331163 TMEM199Q8N511 208 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 FAM71DQ8N9W8 422 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 C3orf20Q8ND61 904 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 SPATA18Q8TC71 538 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 MAD1L1Q9Y6D9 718 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 DFFAO00273 331 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 ATF2P15336 505 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 GJA1P17302 382 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 EPHB2P29323 1055 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 PEX19P40855 299 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 CACNA2D1P54289 1103 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 KRT17Q04695 432 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 ALS2CLQ60I27 953 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 FUT10Q6P4F1 479 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 DCLRE1AQ6PJP8 1040 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 GSTCDQ8NEC7 633 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 TBCBQ99426 244 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 FTHL17Q9BXU8 183 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 R3HDM2Q9Y2K5 976 aaKnown RBP16.53■□□□□ 0.24
PDGFB-201ENST00000331163 SCN1AP35498 2009 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 GRXCR1A8MXD5 290 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 PIRO00625 290 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 MCF2LO15068 1137 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 FECHP22830 423 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 AMPD1P23109 780 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 PAX7P23759 505 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 CDC25CP30307 473 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 CTNNA1P35221 906 aaKnown RBP16.53■□□□□ 0.24
PDGFB-201ENST00000331163 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
PDGFB-201ENST00000331163 TAS1R1Q7RTX1 841 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 VPS52Q8N1B4 723 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 OR10T2Q8NGX3 314 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 TMLHEQ9NVH6 421 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.53■□□□□ 0.24
PDGFB-201ENST00000331163 EZRP15311 586 aaKnown RBP16.53■□□□□ 0.24
PDGFB-201ENST00000331163 SLC6A3Q01959 620 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 PLPP4Q5VZY2 271 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 LRRTM3Q86VH5 581 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
PDGFB-201ENST00000331163 VPS37BQ9H9H4 285 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 GGT7Q9UJ14 662 aa16.53■□□□□ 0.24
PDGFB-201ENST00000331163 C9IYK1 514 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 TJP3O95049 919 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 ZBED1O96006 694 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 URODP06132 367 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 MDH1P40925 334 aaKnown RBP16.52■□□□□ 0.24
PDGFB-201ENST00000331163 SNCBQ16143 134 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 UPP1Q16831 310 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 GPRIN1Q7Z2K8 1008 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 PAIP2Q9BPZ3 127 aaKnown RBP16.52■□□□□ 0.24
PDGFB-201ENST00000331163 TSEN34Q9BSV6 310 aaKnown RBP16.52■□□□□ 0.24
PDGFB-201ENST00000331163 TMEM161AQ9NX61 479 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 INTUQ9ULD6 942 aa16.52■□□□□ 0.24
PDGFB-201ENST00000331163 CYP1A2P05177 515 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 MYZAPP0CAP1 466 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 RBP3P10745 1247 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 NEFHP12036 1026 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 WEE1P30291 646 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 PSEN1P49768 467 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 EIF3EP60228 445 aaKnown RBP16.52■□□□□ 0.23
PDGFB-201ENST00000331163 PLD1Q13393 1074 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 LCLAT1Q6UWP7 414 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 DCP1BQ8IZD4 617 aaKnown RBP16.52■□□□□ 0.23
PDGFB-201ENST00000331163 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 ACTL9Q8TC94 416 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 SMARCD1Q96GM5 515 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 WDCPQ9H6R7 721 aa16.52■□□□□ 0.23
PDGFB-201ENST00000331163 NOVA2Q9UNW9 492 aaKnown RBP16.52■□□□□ 0.23
PDGFB-201ENST00000331163 PER2O15055 1255 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 LSM8O95777 96 aaKnown RBP16.51■□□□□ 0.23
PDGFB-201ENST00000331163 AMHP03971 560 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 KRT7P08729 469 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 CTNNB1P35222 781 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 BBS9Q3SYG4 887 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
PDGFB-201ENST00000331163 DONSONQ9NYP3 566 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 UBP1Q9NZI7 540 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 UNC80Q8N2C7 3258 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 CYP1A1P04798 512 aaPredicted RBP16.51■□□□□ 0.23
PDGFB-201ENST00000331163 KCNE1P15382 129 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 ARSEP51690 589 aa16.51■□□□□ 0.23
PDGFB-201ENST00000331163 CLDN10P78369 228 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms