RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 SIAH1Q8IUQ4 282 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 XAB2Q9HCS7 855 aaKnown RBP25.22■■□□□ 1.63
SOX1-201ENST00000330949 A0A0B4J269 797 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 FAM189A1O60320 539 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 PDAP1Q13442 181 aaKnown RBP25.22■■□□□ 1.63
SOX1-201ENST00000330949 MTM1Q13496 603 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 TUBB3Q13509 450 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 CCDC80Q76M96 950 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 OSBPL6Q9BZF3 934 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 MKS1Q9NXB0 559 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 MATN2O00339 956 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 TMEM63AO94886 807 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 WEE2P0C1S8 567 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 NUP107P57740 925 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 NAA20P61599 178 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 MRPS5P82675 430 aaKnown RBP25.21■■□□□ 1.63
SOX1-201ENST00000330949 ANGEL2Q5VTE6 544 aaKnown RBP25.21■■□□□ 1.63
SOX1-201ENST00000330949 ADCY4Q8NFM4 1077 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 FEZF2Q8TBJ5 459 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 GIPC3Q8TF64 312 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 C20orf27Q9GZN8 174 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 ZNF180Q9UJW8 692 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 TMED5Q9Y3A6 229 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 SIN3BO75182 1162 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 ALOX15P16050 662 aaPredicted RBP25.21■■□□□ 1.63
SOX1-201ENST00000330949 ZNF23P17027 643 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 ITGAXP20702 1163 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 ELK3P41970 407 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 SH3BP5LQ7L8J4 393 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 CBWD2Q8IUF1 395 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 WRAP73Q9P2S5 460 aaPredicted RBP25.21■■□□□ 1.63
SOX1-201ENST00000330949 ZNRF3Q9ULT6 936 aa25.21■■□□□ 1.63
SOX1-201ENST00000330949 GNEQ9Y223 722 aaKnown RBP25.21■■□□□ 1.63
SOX1-201ENST00000330949 SERPINB7O75635 380 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 NDUFB10O96000 172 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 RBP3P10745 1247 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 YWHAGP61981 247 aaKnown RBP eCLIP25.2■■□□□ 1.62
SOX1-201ENST00000330949 TRIM72Q6ZMU5 477 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 SP8Q8IXZ3 490 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 PIWIL2Q8TC59 973 aaKnown RBP25.2■■□□□ 1.62
SOX1-201ENST00000330949 MKL1Q969V6 931 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 SH2D3AQ9BRG2 576 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 PARVAQ9NVD7 372 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 KBTBD13C9JR72 458 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 CYB561D2O14569 222 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 BPGMP07738 259 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 RELAQ04206 551 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 C16orf72Q14CZ0 275 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 MEX3CQ5U5Q3 659 aaKnown RBP25.2■■□□□ 1.62
SOX1-201ENST00000330949 PLA2G4FQ68DD2 849 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 AMIGO2Q86SJ2 522 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 JDP2Q8WYK2 163 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 APOL6Q9BWW8 343 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 SPATA7Q9P0W8 599 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 IVNS1ABPQ9Y6Y0 642 aa25.2■■□□□ 1.62
SOX1-201ENST00000330949 GAS7O60861 476 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 GH2P01242 217 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 MYL4P12829 197 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 DSG3P32926 999 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 RPL22P35268 128 aaKnown RBP25.19■■□□□ 1.62
SOX1-201ENST00000330949 GK3PQ14409 553 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 LPCAT2Q7L5N7 544 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 TRIML2Q8N7C3 387 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 RSAD2Q8WXG1 361 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 SLC13A1Q9BZW2 595 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 MYOCOSA0A1B0GUC4 107 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 TCRBV7S3A2A0A539 114 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 DDX39AO00148 427 aaKnown RBP25.19■■□□□ 1.62
SOX1-201ENST00000330949 TRPA1O75762 1119 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 L1CAMP32004 1257 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 PADI6Q6TGC4 694 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 TRPC4APQ8TEL6 797 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 SQORQ9Y6N5 450 aa25.19■■□□□ 1.62
SOX1-201ENST00000330949 ZBED1O96006 694 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 THRAP10827 490 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 TCF4P15884 667 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 GDF10P55107 478 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 ADGRE1Q14246 886 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 SYCP2LQ5T4T6 812 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 USP37Q86T82 979 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 IGDCC3Q8IVU1 814 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 DCAF4Q8WV16 495 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 CCDC97Q96F63 343 aaPredicted RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 COX4I2Q96KJ9 171 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 HNRNPABQ99729 332 aaKnown RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 FRMD8P1Q9BZ68 369 aaPredicted RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 FAM96AQ9H5X1 160 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 TDRD3Q9H7E2 651 aaKnown RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 C1orf112Q9NSG2 853 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 FAM198AQ9UFP1 575 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 FOCADQ5VW36 1801 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 HTR3EA5X5Y0 456 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 CDKN2BP42772 138 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 PSMC5P62195 406 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 CTAGE3PQ8IX95 158 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 SLC15A3Q8IY34 581 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 TSPAN14Q8NG11 270 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 PPP1R14CQ8TAE6 165 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 C17orf50Q8WW18 174 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 CCT7Q99832 543 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms