RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 DCPSQ96C86 337 aaKnown RBP7.34□□□□□ -1.24
BEST3-202ENST00000330891 PGBD4Q96DM1 585 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 FAM161BQ96MY7 647 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 DDX50Q9BQ39 737 aaKnown RBP7.34□□□□□ -1.24
BEST3-202ENST00000330891 NIFKQ9BYG3 293 aaKnown RBP7.34□□□□□ -1.24
BEST3-202ENST00000330891 YY1AP1Q9H869 796 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 IFT122Q9HBG6 1241 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 DPP3Q9NY33 737 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 PRKAG3Q9UGI9 489 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 CLEC11AQ9Y240 323 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 INPP5FQ9Y2H2 1132 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 SNX10Q9Y5X0 201 aa7.34□□□□□ -1.24
BEST3-202ENST00000330891 NFASCO94856 1347 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 SMIM24O75264 130 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 SORBS2O94875 1100 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 NCF2P19878 526 aaPredicted RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 GPD1P21695 349 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 MSX2P35548 267 aaPredicted RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 GPD2P43304 727 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 NDUFV1P49821 464 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 EFNA5P52803 228 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 RPL10AP62906 217 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 MBTD1Q05BQ5 628 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 AP1B1Q10567 949 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 GRM1Q13255 1194 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 KPNB1Q14974 876 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 PDK4Q16654 411 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 CELF3Q5SZQ8 465 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 VWA5B1Q5TIE3 1220 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 ILDR2Q71H61 639 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 DCLK2Q8N568 766 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 PCDH19Q8TAB3 1148 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 DENND1AQ8TEH3 1009 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 VCPIP1Q96JH7 1222 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 ZMAT2Q96NC0 199 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 SNRNP25Q9BV90 132 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 NMUR2Q9GZQ4 415 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 RNF39Q9H2S5 420 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 MAP3K20Q9NYL2 800 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 KANSL3Q9P2N6 904 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 TCRBV5S1A1TA0A578 114 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 WDR27A2RRH5 827 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 CFAP73A6NFT4 308 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 A6NJR5 290 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 TYROBPO43914 113 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 DCTN3O75935 186 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 ITGAVP06756 1048 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 CSH1P0DML2 217 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 CSH2P0DML3 217 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 TPH1P17752 444 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 EIF4BP23588 611 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 SERPINB6P35237 376 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 MLH1P40692 756 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 POLE2P56282 527 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 MCL1Q07820 350 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 SLC10A2Q12908 348 aaPredicted RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 UBAP2LQ14157 1087 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 MXD4Q14582 209 aaPredicted RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 CCDC14Q49A88 953 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 NXNQ6DKJ4 435 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 RINLQ6ZS11 566 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 TTC30AQ86WT1 665 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 PLD5Q8N7P1 536 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.33□□□□□ -1.24
BEST3-202ENST00000330891 DCAKDQ8WVC6 231 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 SLC7A6OSQ96CW6 309 aaPredicted RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 SRPK1Q96SB4 655 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 MPHOSPH6Q99547 160 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 MIPEPQ99797 713 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 FERMT1Q9BQL6 677 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 EBF4Q9BQW3 602 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 C20orf27Q9GZN8 174 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 MAN1C1Q9NR34 630 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 ARHGEF3Q9NR81 526 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 GEMIN8Q9NWZ8 242 aaKnown RBP7.33□□□□□ -1.24
BEST3-202ENST00000330891 C15orf41Q9Y2V0 281 aa7.33□□□□□ -1.24
BEST3-202ENST00000330891 SOCS7O14512 581 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 ABLIM1O14639 778 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 ATG7O95352 703 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 GOT1P17174 413 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 SDC4P31431 198 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 ARL1P40616 181 aaPredicted RBP7.32□□□□□ -1.24
BEST3-202ENST00000330891 RFC5P40937 340 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 RTP1P59025 263 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 CES4AQ5XG92 561 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 XRRA1Q6P2D8 792 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 ZPBP2Q6X784 338 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 BBS12Q6ZW61 710 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 MAP7D3Q8IWC1 876 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 TNS4Q8IZW8 715 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 SPATA6LQ8N4H0 392 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 CCDC185Q8N715 623 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 STKLD1Q8NE28 680 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 WDR60Q8WVS4 1066 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 C10orf82Q8WW14 230 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 OPTNQ96CV9 577 aa7.32□□□□□ -1.24
BEST3-202ENST00000330891 CCDC134Q9H6E4 229 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms