RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SUV39H1O43463 412 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 DFNA5O60443 496 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 HIP1RO75146 1068 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 IGLV3-19P01714 112 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 NR5A1Q13285 461 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 STARD3Q14849 445 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 KYAT1Q16773 422 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 ANO4Q32M45 955 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 CFAP221Q4G0U5 840 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 KCNT1Q5JUK3 1230 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 INO80CQ6PI98 192 aaPredicted RBP15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 EXD3Q8N9H8 876 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 SCFD1Q8WVM8 642 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 RFFLQ8WZ73 363 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 FAM212AQ96EL1 285 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 SEPT3Q9UH03 358 aa15.76■□□□□ 0.11
CTHRC1-201ENST00000330295 C2CD3Q4AC94 2353 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 ZNF840PA6NDX5 716 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 PRRT4C9JH25 899 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 OAS1P00973 400 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 ORC1Q13415 861 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 ILKQ13418 452 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 NUMA1Q14980 2115 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 TMEM132DQ14C87 1099 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 INTS6LQ5JSJ4 861 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 DIS3L2Q8IYB7 885 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 PKMYT1Q99640 499 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 C17orf75Q9HAS0 396 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 SPHK2Q9NRA0 654 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 STARD5Q9NSY2 213 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 DNAJC17Q9NVM6 304 aaKnown RBP15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 GTF3C4Q9UKN8 822 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 BSNQ9UPA5 3926 aa15.75■□□□□ 0.11
CTHRC1-201ENST00000330295 TRAK2O60296 914 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 FAM189A1O60320 539 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 MBL2P11226 248 aaPredicted RBP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 MUTP22033 750 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 ACAT1P24752 427 aaKnown RBP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 FOSBP53539 338 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 USP46P62068 366 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 ECM1Q16610 540 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 KDM7AQ6ZMT4 941 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 TMEM25Q86YD3 366 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 TMPRSS6Q8IU80 811 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 SPATA2LQ8IUW3 424 aaPredicted RBP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 CD302Q8IX05 232 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 LSMEM2Q8N112 164 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 TNFRSF25Q93038 417 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 SIPA1Q96FS4 1042 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 FUBP3Q96I24 572 aaKnown RBP eCLIP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 NTPCRQ9BSD7 190 aaKnown RBP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 BACH2Q9BYV9 841 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 C6orf106Q9H6K1 298 aaPredicted RBP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.74■□□□□ 0.11
CTHRC1-201ENST00000330295 KPNA7A9QM74 516 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 DXOO77932 396 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 MPOP05164 745 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 ITGAVP06756 1048 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 PPP3CCP48454 512 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 ERVPABLB-1P60509 514 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 INSM1Q01101 510 aaPredicted RBP15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 MAPK7Q13164 816 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 SV2CQ496J9 727 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 ADAT2Q7Z6V5 191 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 EID2Q8N6I1 236 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 TMEM161BQ8NDZ6 487 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 PRCCQ92733 491 aaPredicted RBP15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 SPATA17Q96L03 361 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 DDX43Q9NXZ2 648 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 DERAQ9Y315 318 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 PCDHB1Q9Y5F3 818 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 STON1Q9Y6Q2 735 aa15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 SPTBN1Q01082 2364 aaKnown RBP15.73■□□□□ 0.11
CTHRC1-201ENST00000330295 DTNBO60941 627 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 ABL1P00519 1130 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 MAPTP10636 758 aaKnown RBP15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 ACADMP11310 421 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 ABCB4P21439 1286 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 MAGEA11P43364 429 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 MYL7Q01449 175 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 DENND5BQ6ZUT9 1274 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 FAM124AQ86V42 546 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 BBS7Q8IWZ6 715 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 PDCL2Q8N4E4 241 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 TMX3Q96JJ7 454 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 PSMG3-AS1Q96PY0 264 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 ELF4Q99607 663 aaPredicted RBP15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 TTLL2Q9BWV7 592 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 ADAMTS1Q9UHI8 967 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 MAN2B2Q9Y2E5 1009 aa15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.72■□□□□ 0.11
CTHRC1-201ENST00000330295 CLEC18AA5D8T8 446 aa15.71■□□□□ 0.11
CTHRC1-201ENST00000330295 SFI1A8K8P3 1242 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms