RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TCRBV9S1A1TA0A576 114 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 CFAP73A6NFT4 308 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 A6NJR5 290 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 ZNF487B1APH4 448 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 PIRO00625 290 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 DYNC1LI2O43237 492 aaPredicted RBP15.15■□□□□ 0.02
TPM3-206ENST00000330188 MGRN1O60291 552 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 EDF1O60869 148 aaKnown RBP15.15■□□□□ 0.02
TPM3-206ENST00000330188 MAP3K6O95382 1288 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 FGFR1P11362 822 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 CYP2C9P11712 490 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 CCDC130P13994 396 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 DESP17661 470 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 PTPN9P43378 593 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 MNAT1P51948 309 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 BST2Q10589 180 aaKnown RBP15.15■□□□□ 0.02
TPM3-206ENST00000330188 HIC1Q14526 733 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 PCBP1Q15365 356 aaKnown RBP eCLIP15.15■□□□□ 0.028e-7■■□□□ 13.6
TPM3-206ENST00000330188 LRRC8CQ8TDW0 803 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
TPM3-206ENST00000330188 TRIM6Q9C030 488 aaPredicted RBP15.15■□□□□ 0.02
TPM3-206ENST00000330188 ZBED1O96006 694 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 ADORA2BP29275 332 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 ATXN1P54253 815 aaKnown RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 CCDC15Q0P6D6 951 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 FAM110CQ1W6H9 321 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 PPP6R3Q5H9R7 873 aaPredicted RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 FBXO47Q5MNV8 452 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 SLC26A9Q7LBE3 791 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 TBC1D1Q86TI0 1168 aaPredicted RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 BANPQ8N9N5 519 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 ANKRD52Q8NB46 1076 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 CENPIQ92674 756 aaPredicted RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 NRDE2Q9H7Z3 1164 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 ETNK2Q9NVF9 386 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 SPTLC1O15269 473 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 AVILO75366 819 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 SPAG6O75602 509 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 PDGFRBP09619 1106 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 CYP2F1P24903 491 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 LMO2P25791 158 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 L1CAMP32004 1257 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 GBP2P32456 591 aaPredicted RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 MAGEA6P43360 314 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 RPL34P49207 117 aaKnown RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 BCAT1P54687 386 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 SNCBQ16143 134 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 DPYSL2Q16555 572 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 KBTBD12Q3ZCT8 623 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 FAXCQ5TGI0 409 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 CRYBG2Q8N1P7 616 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 LRRN4Q8WUT4 740 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 TMEM40Q8WWA1 233 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 SLC44A1Q8WWI5 657 aa15.14■□□□□ 0.01
TPM3-206ENST00000330188 ZNF75CPQ92670 426 aaPredicted RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 PARK7Q99497 189 aaKnown RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 GNEQ9Y223 722 aaKnown RBP15.14■□□□□ 0.01
TPM3-206ENST00000330188 SMIM28A0A1B0GU29 152 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 IQCA1LA6NCM1 817 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 SLC15A5A6NIM6 579 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 GOLGA8RI6L899 631 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 TM9SF1O15321 606 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 CD4P01730 458 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 AXLP30530 894 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 GNL1P36915 607 aaPredicted RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 SCNN1AP37088 669 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 YWHAGP61981 247 aaKnown RBP eCLIP15.13■□□□□ 0.01
TPM3-206ENST00000330188 ZNF200P98182 395 aaPredicted RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 PRAMEF19Q5SWL8 479 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 ZNF618Q5T7W0 954 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 ARCQ7LC44 396 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 FAM228AQ86W67 206 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 TCP10LQ8TDR4 215 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 DNAJB3Q8WWF6 145 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 ALKBH8Q96BT7 664 aaKnown RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 KLF6Q99612 283 aaPredicted RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 PTPN18Q99952 460 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 FRMD8Q9BZ67 464 aaPredicted RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 KLC2Q9H0B6 622 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 CD248Q9HCU0 757 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 PNPLA8Q9NP80 782 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 MTMR10Q9NXD2 777 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 GDAP2Q9NXN4 497 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 KLK14Q9P0G3 267 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 PIN4Q9Y237 131 aaKnown RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 KPNA7A9QM74 516 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 C1QAP02745 245 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 LCP1P13796 627 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 NQO1P15559 274 aaKnown RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 ADRA1DP25100 572 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 KCNJ2P63252 427 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 ADAM17P78536 824 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 PTK7Q13308 1070 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 MFSD10Q14728 455 aa15.13■□□□□ 0.01
TPM3-206ENST00000330188 PNMA8AQ86V59 439 aaPredicted RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 CAND1Q86VP6 1230 aaKnown RBP15.13■□□□□ 0.01
TPM3-206ENST00000330188 ZNF276Q8N554 614 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms