RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 TADA2BQ86TJ2 420 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 KBTBD6Q86V97 674 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 C12orf40Q86WS4 652 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 BBS7Q8IWZ6 715 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 SMYD4Q8IYR2 804 aaPredicted RBP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 TSTD1Q8NFU3 115 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 SEMA4DQ92854 862 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 CDK5RAP1Q96SZ6 601 aaKnown RBP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 TSG101Q99816 390 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 NACA2Q9H009 215 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 SPHK2Q9NRA0 654 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 POLR3BQ9NW08 1133 aaPredicted RBP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 MARK1Q9P0L2 795 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 HOOK1Q9UJC3 728 aaKnown RBP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 MED19A0JLT2 244 aaPredicted RBP14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 PMM2O15305 246 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 RHOBTB1O94844 696 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 CD58P19256 250 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 ACO1P21399 889 aaKnown RBP14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 SLC6A11P48066 632 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 PGFP49763 221 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 BTBD8Q5XKL5 378 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 ARHGAP17Q68EM7 881 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 NUDT18Q6ZVK8 323 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 IL17RCQ8NAC3 791 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 DUSP15Q9H1R2 295 aaPredicted RBP14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 MMRN2Q9H8L6 949 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 ARHGEF4Q9NR80 690 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 CISHQ9NSE2 258 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 OSER1Q9NX31 292 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 CLIC5Q9NZA1 410 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 STARD13Q9Y3M8 1113 aa14.31□□□□□ -0.12
GTF3C6-201ENST00000329970 CYP26A1O43174 497 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 CACNG3O60359 315 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 PLA2G4AP47712 749 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 RAD23BP54727 409 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 SEC13P55735 322 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 MESP2Q0VG99 397 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 ELF2Q15723 593 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 USP39Q53GS9 565 aaKnown RBP14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 C2orf27AQ580R0 203 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 RAB41Q5JT25 222 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 EOGTQ5NDL2 527 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 ANKRD40Q6AI12 368 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 TRMT11Q7Z4G4 463 aaKnown RBP14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 TERB1Q8NA31 727 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 SLC4A11Q8NBS3 891 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 OLIG1Q8TAK6 271 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 TMEM176AQ96HP8 235 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 ARRDC1-AS1Q9H2J1 176 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 NMUR1Q9HB89 426 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 DEC1Q9P2X7 70 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 DNMT3LQ9UJW3 386 aa14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 LSM7Q9UK45 103 aaKnown RBP14.3□□□□□ -0.12
GTF3C6-201ENST00000329970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 A0A1W2PQH9 124 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 SCAMP3O14828 347 aaKnown RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 TULP3O75386 442 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 ALDH1A2O94788 518 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 TBX18O95935 607 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 RALAP11233 206 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 RARGP13631 454 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 PMS1P54277 932 aaKnown RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 CBWD6Q4V339 395 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 CBWD3Q5JTY5 395 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 CBWD5Q5RIA9 395 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 PMS2CLQ68D20 193 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 Q6ZNB5 142 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 SCD5Q86SK9 330 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 TMEM25Q86YD3 366 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 ARHGAP18Q8N392 663 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 ANKRD52Q8NB46 1076 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 TXNDC5Q8NBS9 432 aaKnown RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 MDGA1Q8NFP4 955 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 DDX1Q92499 740 aaKnown RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 WBP2Q969T9 261 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 SLC35C1Q96A29 364 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 HEXIM2Q96MH2 286 aaKnown RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 CEP63Q96MT8 703 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 METTL14Q9HCE5 456 aaKnown RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 POLMQ9NP87 494 aaPredicted RBP14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.124e-20■■■■■ 484.4
GTF3C6-201ENST00000329970 VPS45Q9NRW7 570 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 WDR35Q9P2L0 1181 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 ZNF510Q9Y2H8 683 aa14.29□□□□□ -0.12
GTF3C6-201ENST00000329970 SGK1O00141 431 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 PSMA7O14818 248 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 KLF8O95600 359 aaPredicted RBP14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 IRF1P10914 325 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 TBXAS1P24557 533 aaPredicted RBP14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 LAMA1P25391 3075 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 TIE1P35590 1138 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 MPLP40238 635 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 SLC8A3P57103 927 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 YWHAEP62258 255 aaKnown RBP14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 STIM1Q13586 685 aa14.28□□□□□ -0.12
GTF3C6-201ENST00000329970 ZNF394Q53GI3 561 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms