RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 USP15Q9Y4E8 981 aaPredicted RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 MYH7BA7E2Y1 1941 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 FSCN2O14926 492 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 C22orf31O95567 290 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 HOXC6P09630 235 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 GOT1P17174 413 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 ATICP31939 592 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 FASTKD1Q53R41 847 aaKnown RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 ERMARDQ5T6L9 678 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 RNF180Q86T96 592 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 KATNAL2Q8IYT4 538 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 PPTC7Q8NI37 304 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 NUDCD1Q96RS6 583 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 C20orf96Q9NUD7 363 aaPredicted RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 SLC38A7Q9NVC3 462 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 URB1O60287 2271 aaKnown RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 SCN9AQ15858 1988 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 LIASO43766 372 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 NDUFV1P49821 464 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.25
SYNM-201ENST00000328642 SNX17Q15036 470 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 OVOS1Q6IE37 1185 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 PHF13Q86YI8 300 aaPredicted RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 PYROXD2Q8N2H3 581 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 BTNL10A8MVZ5 291 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 STIP1P31948 543 aaKnown RBP16.61■□□□□ 0.25
SYNM-201ENST00000328642 GEMIN4P57678 1058 aaKnown RBP16.61■□□□□ 0.25
SYNM-201ENST00000328642 AUHQ13825 339 aaKnown RBP16.61■□□□□ 0.25
SYNM-201ENST00000328642 ARID3BQ8IVW6 561 aaPredicted RBP16.61■□□□□ 0.25
SYNM-201ENST00000328642 EFHBQ8N7U6 833 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 COLGALT1Q8NBJ5 622 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 SLC4A11Q8NBS3 891 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 COQ4Q9Y3A0 265 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 TSHZ1Q6ZSZ6 1077 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 DDX20Q9UHI6 824 aaKnown RBP16.61■□□□□ 0.25
SYNM-201ENST00000328642 SLC39A10Q9ULF5 831 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 ATP8B3O60423 1300 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 APOEP02649 317 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 UNGP13051 313 aaPredicted RBP16.61■□□□□ 0.25
SYNM-201ENST00000328642 SERPINB6P35237 376 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 PRAMEP78395 509 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 NSUN2Q08J23 767 aaKnown RBP eCLIP16.61■□□□□ 0.25
SYNM-201ENST00000328642 ZCCHC23Q6ZST2 131 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 ILDR2Q71H61 639 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 TRPM8Q7Z2W7 1104 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 ATPAF2Q8N5M1 289 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 DTX3LQ8TDB6 740 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 SERPINB12Q96P63 405 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 SLCO1B3Q9NPD5 702 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 PFDN4Q9NQP4 134 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 SMPD4Q9NXE4 827 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 GTSE1Q9NYZ3 720 aa16.61■□□□□ 0.25
SYNM-201ENST00000328642 GPR182O15218 404 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 GYG2O15488 501 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 EDN1P05305 212 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 ZFXP17010 805 aaPredicted RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 PTPN1P18031 435 aaKnown RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 PNPLA4P41247 253 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 ACADSBP45954 432 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 GBE1Q04446 702 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 FOXD4Q12950 439 aaPredicted RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 ZNF618Q5T7W0 954 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 ALKBH8Q96BT7 664 aaKnown RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 TBCBQ99426 244 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 STARD7Q9NQZ5 370 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 hCG_1818297A0A087WSY0 165 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 TARSP26639 723 aaKnown RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 KBTBD12Q3ZCT8 623 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 STAMBPL1Q96FJ0 436 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 TSSK1BQ9BXA7 367 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 PCYOX1Q9UHG3 505 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 IPPQ9Y573 584 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 ENO1P06733 434 aaKnown RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 PAEPP09466 180 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 HOXD10P28358 340 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 CCL23P55773 120 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 CHSY1Q86X52 802 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 RASGEF1CQ8N431 466 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 RPRD1AQ96P16 312 aaPredicted RBP16.6■□□□□ 0.25
SYNM-201ENST00000328642 PCDH9Q9HC56 1237 aa16.6■□□□□ 0.25
SYNM-201ENST00000328642 C3orf70A6NLC5 250 aaPredicted RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 CES2O00748 559 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 BUD23O43709 281 aaKnown RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 B4GALT4O60513 344 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 F7P08709 466 aaPredicted RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 PEX5P50542 639 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 DPYSL3Q14195 570 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 POU6F1Q14863 301 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 RGMBQ6NW40 437 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 C16orf46Q6P387 395 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 B3GALNT2Q8NCR0 500 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 KCNK16Q96T55 309 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 ROPN1BQ9BZX4 212 aaPredicted RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 ROPN1Q9HAT0 212 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms