RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 INPP5DQ92835 1189 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 ACAP3Q96P50 834 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 SNRNP25Q9BV90 132 aaKnown RBP14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 KLC2Q9H0B6 622 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 CXCL16Q9H2A7 254 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 ZNF408Q9H9D4 720 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 RNPEPL1Q9HAU8 725 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 PAK5Q9P286 719 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 SYNJ2BP-COX16A0A087WUM0 186 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 HCRTO43612 131 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 PEX11AO75192 247 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 PCK1P35558 622 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 SLC26A2P50443 739 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 RBP5P82980 135 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 KCNJ11Q14654 390 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 RPAINQ86UA6 219 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 OR6B3Q8NGW1 331 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 PCDH19Q8TAB3 1148 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 USP29Q9HBJ7 922 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 PCMTD2Q9NV79 361 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 COX16Q9P0S2 106 aa14.6□□□□□ -0.07
ATP2C1-201ENST00000328560 EVPLQ92817 2033 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 KRT37O76014 449 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 PDGFRBP09619 1106 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 ESRRAP11474 423 aaPredicted RBP14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 SLC26A11Q86WA9 606 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 ZNF276Q8N554 614 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 CYLDQ9NQC7 956 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 ASB14A6NK59 587 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 PPEF2O14830 753 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 UPP2O95045 317 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 C22orf31O95567 290 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 RCN2Q14257 317 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 CCDC62Q6P9F0 684 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 TRMT10BQ6PF06 316 aaKnown RBP14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 FGD4Q96M96 766 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 MIPEPQ99797 713 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 MRPL45Q9BRJ2 306 aaKnown RBP14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 CYP3A43Q9HB55 503 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 PCDH18Q9HCL0 1135 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 SSU72Q9NP77 194 aaKnown RBP14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 HES2Q9Y543 173 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 SSC5DA1L4H1 1573 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 RGPD3A6NKT7 1758 aaPredicted RBP14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 RGPD4Q7Z3J3 1758 aa14.59□□□□□ -0.07
ATP2C1-201ENST00000328560 I3L4J1 428 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 TOP3BO95985 862 aaKnown RBP14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 CALB2P22676 271 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 ADORA2BP29275 332 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 GRIA1P42261 906 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 GBE1Q04446 702 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 TTC39BQ5VTQ0 682 aaPredicted RBP14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 CYP4V2Q6ZWL3 525 aaPredicted RBP14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 ARID3BQ8IVW6 561 aaPredicted RBP14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 MIEF2Q96C03 454 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 ETNK2Q9NVF9 386 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 RBPJLQ9UBG7 517 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 HESX1Q9UBX0 185 aa14.58□□□□□ -0.07
ATP2C1-201ENST00000328560 SNRPAP09012 282 aaKnown RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 MCF2P10911 925 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 LCP1P13796 627 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 DESP17661 470 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 CCNA1P78396 465 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 CRADDP78560 199 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 ACAP1Q15027 740 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 DSTYKQ6XUX3 929 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 BZW1Q7L1Q6 419 aaKnown RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 ALYREFQ86V81 257 aaKnown RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 MPP5Q8N3R9 675 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 PQLC3Q8N755 202 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 DTX3LQ8TDB6 740 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 CLEC4CQ8WTT0 213 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 STK32AQ8WU08 396 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 AFG1LQ8WV93 481 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 FAM49AQ9H0Q0 323 aaPredicted RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 PPARGC1AQ9UBK2 798 aaKnown RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 FETUBQ9UGM5 382 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 SUFUQ9UMX1 484 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 A0A0G2JLL6 359 aaPredicted RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 IL4RP24394 825 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 CHI3L2Q15782 390 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 BOLA3Q53S33 107 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 ZCCHC23Q6ZST2 131 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 PRRT2Q7Z6L0 340 aaPredicted RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 PPP1R14CQ8TAE6 165 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 OPTNQ96CV9 577 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 NSL1Q96IY1 281 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 CADM1Q9BY67 442 aaKnown RBP14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 CEP41Q9BYV8 373 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 MROH8Q9H579 483 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 SLC5A4Q9NY91 659 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 PARP14Q460N5 1801 aa14.58□□□□□ -0.08
ATP2C1-201ENST00000328560 SMAPO00193 183 aa14.57□□□□□ -0.08
ATP2C1-201ENST00000328560 CHADO15335 359 aa14.57□□□□□ -0.08
ATP2C1-201ENST00000328560 CCDC22O60826 627 aa14.57□□□□□ -0.08
ATP2C1-201ENST00000328560 CNMDO75829 334 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms