RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 ADAMTS5Q9UNA0 930 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 THRAP3Q9Y2W1 955 aaKnown RBP1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 INSRP06213 1382 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 COL14A1Q05707 1796 aaKnown RBP1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 ANKRD26Q9UPS8 1709 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 hCG_1984214I3L0E3 225 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 PRKCBP05771 671 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 MYBP10242 640 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 DGKEP52429 567 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 SRSF7Q16629 238 aaKnown RBP eCLIP1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 TBC1D25Q3MII6 688 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 MTHFD1LQ6UB35 978 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 ABHD11Q8NFV4 315 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 DPF1Q92782 380 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 NT5C1BQ96P26 610 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 SEMA4CQ9C0C4 833 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF518BQ9C0D4 1074 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 NOB1Q9ULX3 412 aaKnown RBP1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 MRPS17Q9Y2R5 130 aaKnown RBP1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 ARHGEF10O15013 1369 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 PLEKHG1Q9ULL1 1385 aa1.98□□□□□ -2.09
CCDC144A-201ENST00000328495 ERICH3Q5RHP9 1530 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 PNPLA6Q8IY17 1366 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 TJP3O95049 919 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CSF1RP07333 972 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CERS1P27544 350 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 SP2Q02086 613 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CTBP1Q13363 440 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 PLA1AQ53H76 456 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CERCAMQ5T4B2 595 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 NXNQ6DKJ4 435 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 Q6ZWC4 215 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 IL31RAQ8NI17 732 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 BPIFB1Q8TDL5 484 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 JDP2Q8WYK2 163 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 REPS1Q96D71 796 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 DAZAP1Q96EP5 407 aaKnown RBP1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 DPCDQ9BVM2 203 aaPredicted RBP1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 TJP1Q07157 1748 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 KIAA1551Q9HCM1 1747 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 DNAJC9-AS1A6NH13 148 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CGB1A6NKQ9 187 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 INO80B-WBP1J3KQ70 363 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 SMIM22K7EJ46 135 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF213O14771 459 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 KCNA3P22001 575 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CACNB3P54284 484 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 NFE2Q16621 373 aaPredicted RBP1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 PROSER3Q2NL68 480 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 LRIT3Q3SXY7 679 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 ARHGAP29Q52LW3 1261 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 NAPRTQ6XQN6 538 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 TRIM72Q6ZMU5 477 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF280BQ86YH2 543 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 TCEAL8Q8IYN2 117 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 SPARTQ8N0X7 666 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 ABRAQ8N0Z2 381 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 MAGEB6Q8N7X4 407 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 RAPGEF4Q8WZA2 1011 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 SMG7Q92540 1137 aaKnown RBP1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 PPP1R9BQ96SB3 815 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC29A3Q9BZD2 475 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 INO80BQ9C086 356 aaPredicted RBP1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 A1CFQ9NQ94 594 aaKnown RBP1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 EID1Q9Y6B2 187 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 EEA1Q15075 1411 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 NHSQ6T4R5 1651 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 MYOM2P54296 1465 aa1.97□□□□□ -2.09
CCDC144A-201ENST00000328495 CFAP69A5D8W1 941 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 MBD3L4A6NDZ8 208 aaPredicted RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 MBD3L3A6NE82 208 aaPredicted RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 PSMD9O00233 223 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 FRS3O43559 492 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 CELA2AP08217 269 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 ADORA2AP29274 412 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 MTHFSP49914 203 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 TUBA4AP68366 448 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 HOXA4Q00056 320 aaPredicted RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 TFF2Q03403 129 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 CNN3Q15417 329 aaKnown RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 INSCQ1MX18 579 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 ZIK1Q3SY52 487 aaPredicted RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 PRAMEF17Q5VTA0 474 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 DCAF12L1Q5VU92 463 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 PPP4R4Q6NUP7 873 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF782Q6ZMW2 699 aaPredicted RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 RAVER1Q8IY67 606 aaKnown RBP1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 IZUMO1Q8IYV9 350 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 KIAA0319LQ8IZA0 1049 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 VGLL2Q8N8G2 317 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 DDB2Q92466 427 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 C22orf23Q9BZE7 217 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 ATP6V0A4Q9HBG4 840 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 GABRQQ9UN88 632 aa1.96□□□□□ -2.09
CCDC144A-201ENST00000328495 FHAD1B1AJZ9 1412 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 LMO7Q8WWI1 1683 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 GOLGA6CA6NDK9 693 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 GOLGA6BA6NDN3 693 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 ISM1B1AKI9 464 aa1.96□□□□□ -2.1
CCDC144A-201ENST00000328495 H7C1Q1 480 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms