RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CENPIQ92674 756 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 NT5C3BQ969T7 300 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 MYRFLQ96LU7 910 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 ABCC13Q9NSE7 274 aa10.71□□□□□ -0.69
VIPAS39-201ENST00000327028 RANBP2P49792 3224 aaKnown RBP10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 A0A1W2PQH9 124 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 CAPN9O14815 690 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 C8AP07357 584 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 SPATA31D3P0C874 917 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 PRLRP16471 622 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 HMGA1P17096 107 aaKnown RBP10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 PSEN1P49768 467 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 SULT1E1P49888 294 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 LRRC38Q5VT99 294 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 OTUD1Q5VV17 481 aaPredicted RBP10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 SYPL2Q5VXT5 272 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 BNIPLQ7Z465 357 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 ITIH5Q86UX2 942 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 ARFGAP1Q8N6T3 406 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 UBL4BQ8N7F7 174 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 PDZD8Q8NEN9 1154 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 FAM172AQ8WUF8 416 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 SLC22A17Q8WUG5 538 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 PSMG2Q969U7 264 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 TBCBQ99426 244 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 NPY6RQ99463 290 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 NMUR1Q9HB89 426 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 NAALADL1Q9UQQ1 740 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 ASB3Q9Y575 518 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 PCDHA3Q9Y5H8 950 aa10.71□□□□□ -0.7
VIPAS39-201ENST00000327028 CHD7Q9P2D1 2997 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 A0A1W2PPC1 479 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 URI1O94763 535 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 ZDHHC11BP0C7U3 371 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 NCAM1P13591 858 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TCP1P17987 556 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TAS2R40P59535 323 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 ATP11AP98196 1134 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 SLC25A11Q02978 314 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 MLLT1Q03111 559 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TAF10Q12962 218 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TUBB2AQ13885 445 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 BTBD8Q5XKL5 378 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 STRADAQ7RTN6 431 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 RHOT1Q8IXI2 618 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 HDAC7Q8WUI4 952 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 EDEM1Q92611 657 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 KRT35Q92764 455 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 OSBPL9Q96SU4 736 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TUBB2BQ9BVA1 445 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TLR8Q9NR97 1041 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 CLIC5Q9NZA1 410 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 SAR1BQ9Y6B6 198 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 CES2O00748 559 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 ENDOD1O94919 500 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 LRG1P02750 347 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TCF4P15884 667 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 SSR1P43307 286 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 PEX5P50542 639 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 DNA2P51530 1060 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 HDAC4P56524 1084 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 HADHQ16836 314 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 CDO1Q16878 200 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 SH3PXD2AQ5TCZ1 1133 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 POLNQ7Z5Q5 900 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 PGAP3Q96FM1 320 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 MAN1C1Q9NR34 630 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 OSER1Q9NX31 292 aa10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 MAGED2Q9UNF1 606 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.7□□□□□ -0.7
VIPAS39-201ENST00000327028 MYO7AQ13402 2215 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 MIPP30301 263 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 RDXP35241 583 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 PGFP49763 221 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 PITX1P78337 314 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 TAF12Q16514 161 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 MSANTD2Q6P1R3 559 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 DQX1Q8TE96 717 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 ALG3Q92685 438 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 MRPL38Q96DV4 380 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 CARD9Q9H257 536 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 SMOC2Q9H3U7 446 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 UXTQ9UBK9 157 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 MRFAP1Q9Y605 127 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 TRANK1O15050 2925 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 OBSL1O75147 1896 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 KCNK3O14649 394 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 ZMYND10O75800 440 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 TRUB2O95900 331 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 EPCAMP16422 314 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 HOXA9P31269 272 aa10.69□□□□□ -0.7
VIPAS39-201ENST00000327028 RWDD2BP57060 319 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms