RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GJA8P48165 433 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 PGFP49763 221 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 SULT1E1P49888 294 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 TSPY1Q01534 308 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 NNTQ13423 1086 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 SLC25A52Q3SY17 297 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 TAS1R1Q7RTX1 841 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 BNIPLQ7Z465 357 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 RFX6Q8HWS3 928 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 PYROXD2Q8N2H3 581 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 ARMC5Q96C12 935 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 NPY6RQ99463 290 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 PCDH18Q9HCL0 1135 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 MTMR10Q9NXD2 777 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 ZBED1O96006 694 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 PAX3P23760 479 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 UAP1Q16222 522 aaPredicted RBP19.21■□□□□ 0.67
USP39-201ENST00000323701 BOLA3Q53S33 107 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 UBAP2Q5T6F2 1119 aaKnown RBP19.21■□□□□ 0.67
USP39-201ENST00000323701 TTC9BQ8N6N2 239 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 SLC35B2Q8TB61 432 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 TMEM121Q9BTD3 319 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 VIPAS39Q9H9C1 493 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 POPDC2Q9HBU9 364 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 HOMER3Q9NSC5 361 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 EFR3BQ9Y2G0 817 aa19.21■□□□□ 0.67
USP39-201ENST00000323701 ALDH2P05091 517 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 GALTP07902 379 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 GGCXP38435 758 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 LBX1P52954 281 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 FAM193AP78312 1265 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 PTK6Q13882 451 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 PPP6R3Q5H9R7 873 aaPredicted RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 PQLC3Q8N755 202 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 EDEM1Q92611 657 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 RUNDC3BQ96NL0 473 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 ZCWPW1Q9H0M4 648 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 DMAP1Q9NPF5 467 aaPredicted RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 CNGB3Q9NQW8 809 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 COL4A6Q14031 1691 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 I6L893 689 aaPredicted RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 KLRC2P26717 231 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 L1CAMP32004 1257 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 HSPA9P38646 679 aaKnown RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 GPR15P49685 360 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 NRLP54845 237 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 VCPP55072 806 aaKnown RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 C1QTNF8P60827 252 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 TERF2Q15554 542 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 ERMARDQ5T6L9 678 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 SDHAF4Q5VUM1 108 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 PCDH19Q8TAB3 1148 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 TEKT4Q8WW24 435 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 PGLYRP2Q96PD5 576 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 ANLNQ9NQW6 1124 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 PIGVQ9NUD9 493 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 ABI2Q9NYB9 513 aaPredicted RBP19.2■□□□□ 0.66
USP39-201ENST00000323701 ASIC3Q9UHC3 531 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 ZNF148Q9UQR1 794 aa19.2■□□□□ 0.66
USP39-201ENST00000323701 TRIM43BA6NCK2 446 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 M0QYT0 321 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 MDM4O15151 490 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 SYF2O95926 243 aaKnown RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 NOS2P35228 1153 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 GDF10P55107 478 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 MRPL58Q14197 206 aaKnown RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 KRT81Q14533 505 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 RTP2Q5QGT7 225 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 DRICH1Q6PGQ1 229 aaPredicted RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 STRADAQ7RTN6 431 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 TMC3Q7Z5M5 1100 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 SPATA2LQ8IUW3 424 aaPredicted RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 MREGQ8N565 214 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 LRRN4Q8WUT4 740 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 ART4Q93070 314 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 TRIM43Q96BQ3 446 aaPredicted RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 RNF157Q96PX1 679 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 FMO2Q99518 471 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 DHX35Q9H5Z1 703 aaKnown RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 FAN1Q9Y2M0 1017 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 TNFRSF10BO14763 440 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 TRAPPC3O43617 180 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 CAPN15O75808 1086 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 FBXO21O94952 628 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 MAP3K6O95382 1288 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 CLTBP09497 229 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 IFRD2Q12894 506 aaPredicted RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 NME3Q13232 169 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 ANKRD20A8PQ5CZ79 823 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 IQCKQ8N0W5 287 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 PLD5Q8N7P1 536 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.19■□□□□ 0.66
USP39-201ENST00000323701 NKD2Q969F2 451 aaPredicted RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 KCTD15Q96SI1 283 aaPredicted RBP19.19■□□□□ 0.66
USP39-201ENST00000323701 TXLNGYQ9BZA5 131 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 AP4E1Q9UPM8 1137 aa19.19■□□□□ 0.66
USP39-201ENST00000323701 LTFP02788 710 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 NCAM1P13591 858 aa19.18■□□□□ 0.66
USP39-201ENST00000323701 OAS2P29728 719 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms