RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SYT15Q9BQS2 421 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 RSAD1Q9HA92 442 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 ARL8BQ9NVJ2 186 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 BFARQ9NZS9 450 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 H3BRB1 525 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 AVPR1AP37288 418 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 FAAP100Q0VG06 881 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 FASTKD1Q53R41 847 aaKnown RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 EFHC2Q5JST6 749 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 ANO7Q6IWH7 933 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 CYP4X1Q8N118 509 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 SKA2Q8WVK7 121 aaPredicted RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 NDRG1Q92597 394 aaKnown RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 TMEM176AQ96HP8 235 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 ATXN3LQ9H3M9 355 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 TUT1Q9H6E5 874 aaKnown RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 PRMT7Q9NVM4 692 aaPredicted RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 CES2O00748 559 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 NCAM1P13591 858 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 AMPD1P23109 780 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 EEF1DP29692 281 aaKnown RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 GNL1P36915 607 aaPredicted RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 CCNFP41002 786 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 RPL10AP62906 217 aaKnown RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 KBTBD12Q3ZCT8 623 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 ZC3H12AQ5D1E8 599 aaKnown RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 SYDE1Q6ZW31 735 aaPredicted RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 SLC9A9Q8IVB4 645 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 APOBEC3GQ9HC16 384 aaKnown RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 KNL1Q8NG31 2342 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 CCL15-CCL14A0A0B4J2E2 113 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 GOLGA8QA0A0J9YX86 632 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 GOLGA8OA6NCC3 632 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 GOLGA8NF8WBI6 632 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 DNALI1O14645 258 aaPredicted RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 TBC1D12O60347 775 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 ZMPSTE24O75844 475 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 HMGCRP04035 888 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 TPBGLP0DKB5 382 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 MUTP22033 750 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 MYBPC2Q14324 1141 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 CCL15Q16663 113 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 OTOAQ7RTW8 1153 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 CELF6Q96J87 481 aaKnown RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 FSD1LQ9BXM9 530 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 CNTRLQ7Z7A1 2325 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 HSD17B4P51659 736 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 LAYNQ6UX15 382 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 EXOC8Q8IYI6 725 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 APPL2Q8NEU8 664 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 PRPF18Q99633 342 aaKnown RBP15.78■□□□□ 0.12
VARS2-201ENST00000321897 RPS6KL1Q9Y6S9 549 aa15.78■□□□□ 0.12
VARS2-201ENST00000321897 NCANO14594 1321 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 MICAL2O94851 1124 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 CYP1A2P05177 515 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 MAPK10P53779 464 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 TPI1P60174 286 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 SLC25A3Q00325 362 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 BRSK2Q8IWQ3 736 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 DNAJC1Q96KC8 554 aaKnown RBP15.77■□□□□ 0.12
VARS2-201ENST00000321897 SPON2Q9BUD6 331 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 MRPL1Q9BYD6 325 aaKnown RBP15.77■□□□□ 0.12
VARS2-201ENST00000321897 SARS2Q9NP81 518 aaKnown RBP15.77■□□□□ 0.12
VARS2-201ENST00000321897 ZMYM2Q9UBW7 1377 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 SPEF2Q9C093 1822 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 RPTORQ8N122 1335 aa15.77■□□□□ 0.12
VARS2-201ENST00000321897 CCDC130P13994 396 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 GTF2A2P52657 109 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 RABGGTBP53611 331 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 UNC45BQ8IWX7 931 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 KCTD17Q8N5Z5 321 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 RDM1Q8NG50 284 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 DMAC2Q9NW81 257 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 CHKBQ9Y259 395 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 NUP98P52948 1817 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 GON4LQ3T8J9 2241 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 H0YGN5 161 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 PMPCBO75439 489 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 NELFEP18615 380 aaKnown RBP15.77■□□□□ 0.11
VARS2-201ENST00000321897 KCNA4P22459 653 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 TSTA3Q13630 321 aaPredicted RBP15.77■□□□□ 0.11
VARS2-201ENST00000321897 PRPSAP1Q14558 356 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 OASLQ15646 514 aaKnown RBP15.77■□□□□ 0.11
VARS2-201ENST00000321897 RNF43Q68DV7 783 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 TMEM192Q8IY95 271 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.77■□□□□ 0.11
VARS2-201ENST00000321897 ZNF516Q92618 1163 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 PABPC5Q96DU9 382 aaKnown RBP15.77■□□□□ 0.11
VARS2-201ENST00000321897 CCDC138Q96M89 665 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 DDIT4Q9NX09 232 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 STAP1Q9ULZ2 295 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 TSC22D4Q9Y3Q8 395 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 NFS1Q9Y697 457 aa15.77■□□□□ 0.11
VARS2-201ENST00000321897 FOXN2P32314 431 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 AP3M2P53677 418 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 TAP1Q03518 808 aa15.76■□□□□ 0.11
VARS2-201ENST00000321897 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms