RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 WDR78Q5VTH9 848 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 CC2D2BQ6DHV5 1058 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 ARPINQ7Z6K5 226 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 WDTC1Q8N5D0 677 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 EMC1Q8N766 993 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 GCNAQ96QF7 691 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 MMP19Q99542 508 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 POLR3FQ9H1D9 316 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-202ENST00000321728 FEM1BQ9UK73 627 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 SORCS3Q9UPU3 1222 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 ZBTB12Q9Y330 459 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-202ENST00000321728 PFDN1O60925 122 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 ENTPD3O75355 529 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 LYPLA1O75608 230 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-202ENST00000321728 ZNF132P52740 706 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 YWHAZP63104 245 aaKnown RBP18.55■□□□□ 0.56
PRKCB-202ENST00000321728 SH2D4BQ5SQS7 431 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 DPY19L2Q6NUT2 758 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 FBXL19Q6PCT2 694 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 UGT2A3Q6UWM9 527 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 RBM44Q6ZP01 1051 aaKnown RBP18.55■□□□□ 0.56
PRKCB-202ENST00000321728 TRIM74Q86UV6 250 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 TRIM73Q86UV7 250 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 KIAA0319LQ8IZA0 1049 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 PIP4K2CQ8TBX8 421 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 JDP2Q8WYK2 163 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 SEPT9Q9UHD8 586 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-202ENST00000321728 CDH22Q9UJ99 828 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 ZNF180Q9UJW8 692 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 DNAJC16Q9Y2G8 782 aa18.55■□□□□ 0.56
PRKCB-202ENST00000321728 SPDYE2BA6NHP3 402 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 KLHL2O95198 593 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 SPDYE6P0CI01 402 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 PIM1P11309 404 aaPredicted RBP18.54■□□□□ 0.56
PRKCB-202ENST00000321728 SPDYE2Q495Y8 402 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 FAXCQ5TGI0 409 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 OLFML2BQ68BL8 750 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 MCPH1Q8NEM0 835 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 CLEC4DQ8WXI8 215 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 JADE3Q92613 823 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 MSTO1Q9BUK6 570 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 PNPLA8Q9NP80 782 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 ARHGAP28Q9P2N2 729 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 SERPINA10Q9UK55 444 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 PCDHA10Q9Y5I2 948 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 MAD1L1Q9Y6D9 718 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 H7C0C1 242 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 ATP9BO43861 1147 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 RAD17O75943 681 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 TMCC1O94876 653 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 ALDH1B1P30837 517 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 ATP5OP48047 213 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 MCF2L2Q86YR7 1114 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 HPS6Q86YV9 775 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 KLHL23Q8NBE8 558 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 SYTL5Q8TDW5 730 aaPredicted RBP18.54■□□□□ 0.56
PRKCB-202ENST00000321728 HAPLN2Q9GZV7 340 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 XPNPEP1Q9NQW7 623 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 SMYD2Q9NRG4 433 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 DNAAF2Q9NVR5 837 aaKnown RBP18.54■□□□□ 0.56
PRKCB-202ENST00000321728 TJP2Q9UDY2 1190 aa18.54■□□□□ 0.56
PRKCB-202ENST00000321728 HERC5Q9UII4 1024 aaKnown RBP18.54■□□□□ 0.56
PRKCB-202ENST00000321728 LOC100653049A0A140TA62 436 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 CAPN8A6NHC0 703 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 KRT34O76011 436 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 C1QAP02745 245 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 RSPH3Q86UC2 560 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 DEFB107AQ8IZN7 70 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 RAB3IL1Q8TBN0 382 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 PIWIL2Q8TC59 973 aaKnown RBP18.53■□□□□ 0.56
PRKCB-202ENST00000321728 CGRRF1Q99675 332 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 RAVER2Q9HCJ3 691 aaKnown RBP18.53■□□□□ 0.56
PRKCB-202ENST00000321728 PTTG2Q9NZH5 202 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 POMPQ9Y244 141 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 SIN3BO75182 1162 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 DGAT1O75907 488 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 CST3P01034 146 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-202ENST00000321728 CSH1P0DML2 217 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 CSH2P0DML3 217 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 OSBPP22059 807 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 ITGA9Q13797 1035 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 PGM5Q15124 567 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 FASTKD1Q53R41 847 aaKnown RBP18.53■□□□□ 0.56
PRKCB-202ENST00000321728 TFAP2BQ92481 460 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 DEFB129Q9H1M3 183 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 DDX18Q9NVP1 670 aaKnown RBP18.53■□□□□ 0.56
PRKCB-202ENST00000321728 RHBDL2Q9NX52 303 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 INPP5FQ9Y2H2 1132 aa18.53■□□□□ 0.56
PRKCB-202ENST00000321728 YDJCA8MPS7 323 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 CHADO15335 359 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 BIRC5O15392 142 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 ITM2AO43736 263 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 CLPTM1O96005 669 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 CRHR1P34998 444 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 MMRN1Q13201 1228 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 PEX6Q13608 980 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 ZNF518BQ9C0D4 1074 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 CISHQ9NSE2 258 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 DTNAQ9Y4J8 743 aa18.52■□□□□ 0.56
PRKCB-202ENST00000321728 RPL5P46777 297 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms