RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SYF2O95926 243 aaKnown RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 KRT14P02533 472 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ALDH2P05091 517 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 TGM2P21980 687 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 GGCXP38435 758 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 OTUD4Q01804 1114 aaKnown RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ELAVL2Q12926 359 aaKnown RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 NFE2Q16621 373 aaPredicted RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 SLC9A4Q6AI14 798 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 FBXO46Q6PJ61 603 aaPredicted RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 PIK3R5Q8WYR1 880 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ARMC5Q96C12 935 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 OXCT2Q9BYC2 517 aaPredicted RBP18.6■□□□□ 0.57
RAB39A-201ENST00000320578 TMEM30AQ9NV96 361 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 TMLHEQ9NVH6 421 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 TMEM51Q9NW97 253 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 DNAJB4Q9UDY4 337 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 ADAM28Q9UKQ2 775 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 TBX21Q9UL17 535 aa18.6■□□□□ 0.57
RAB39A-201ENST00000320578 NRP1O14786 923 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 ZFXP17010 805 aaPredicted RBP18.59■□□□□ 0.57
RAB39A-201ENST00000320578 BDNFP23560 247 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 RDXP35241 583 aaKnown RBP18.59■□□□□ 0.57
RAB39A-201ENST00000320578 HSD17B3P37058 310 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 SULT1E1P49888 294 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 CACNA2D1P54289 1103 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 DHX9Q08211 1270 aaKnown RBP18.59■□□□□ 0.57
RAB39A-201ENST00000320578 DCAF6Q58WW2 860 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 GSTA5Q7RTV2 222 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 CTU1Q7Z7A3 348 aaKnown RBP18.59■□□□□ 0.57
RAB39A-201ENST00000320578 SPATA2LQ8IUW3 424 aaPredicted RBP18.59■□□□□ 0.57
RAB39A-201ENST00000320578 ADAM33Q9BZ11 813 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 PCDH9Q9HC56 1237 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 PCNTO95613 3336 aa18.59■□□□□ 0.57
RAB39A-201ENST00000320578 TANC1Q9C0D5 1861 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 OR6C75A6NL08 312 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 F8W810 466 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 TP73O15350 636 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.57
RAB39A-201ENST00000320578 LTFP02788 710 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 TFE3P19532 575 aaPredicted RBP18.58■□□□□ 0.57
RAB39A-201ENST00000320578 L1CAMP32004 1257 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 ADCY8P40145 1251 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 ATN1P54259 1190 aaPredicted RBP18.58■□□□□ 0.57
RAB39A-201ENST00000320578 NOMO1Q15155 1222 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 TCTN1Q2MV58 587 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 TRIM60Q495X7 471 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 ANKRD20A8PQ5CZ79 823 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 CEP128Q6ZU80 1094 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 BHLHA9Q7RTU4 235 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 ZIM3Q96PE6 472 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 RUFY1Q96T51 708 aa18.58■□□□□ 0.57
RAB39A-201ENST00000320578 TTC3P53804 2025 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 CENPFP49454 3210 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 F9P00740 461 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 FYNP06241 537 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 RARGP13631 454 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 FGFR3P22607 806 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 STIP1P31948 543 aaKnown RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 SMARCB1Q12824 385 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 UAP1Q16222 522 aaPredicted RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 PKN2Q16513 984 aaKnown RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 OTUD1Q5VV17 481 aaPredicted RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 VSTM1Q6UX27 236 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 GPRIN1Q7Z2K8 1008 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 GOLGA6L1Q8N7Z2 621 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 NTAN1Q96AB6 310 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 SCLYQ96I15 445 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 TMEM209Q96SK2 561 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 FZD10Q9ULW2 581 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 AP4E1Q9UPM8 1137 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 FAN1Q9Y2M0 1017 aa18.58■□□□□ 0.56
RAB39A-201ENST00000320578 PRG3Q9Y2Y8 225 aaPredicted RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 COL4A4P53420 1690 aaPredicted RBP18.58■□□□□ 0.56
RAB39A-201ENST00000320578 YJEFN3A6XGL0 299 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 GOLGA8KD6RF30 607 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 E7ENQ6 273 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 APOL1O14791 398 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 MCF2LO15068 1137 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 MAGEA11P43364 429 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 FAM193AP78312 1265 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
RAB39A-201ENST00000320578 CNKSR3Q6P9H4 555 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 PQLC3Q8N755 202 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 NDRG1Q92597 394 aaKnown RBP18.57■□□□□ 0.56
RAB39A-201ENST00000320578 P3H4Q92791 437 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 MTMR10Q9NXD2 777 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 DNAH12Q6ZR08 3092 aa18.57■□□□□ 0.56
RAB39A-201ENST00000320578 SF3B1O75533 1304 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB39A-201ENST00000320578 H0YGN5 161 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 CAPN9O14815 690 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 USP17L7P0C7H9 530 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 GJA8P48165 433 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 ZNF135P52742 658 aaPredicted RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 PMS2P54278 862 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 CCL23P55773 120 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 EIF3BP55884 814 aaKnown RBP18.56■□□□□ 0.56
RAB39A-201ENST00000320578 DYNLT1P63172 113 aa18.56■□□□□ 0.56
RAB39A-201ENST00000320578 SCAPQ12770 1279 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 291.4 ms