RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 PCBP1Q15365 356 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHISA2-201ENST00000319420 TIGD5Q53EQ6 642 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 FNBP1LQ5T0N5 605 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 ERMARDQ5T6L9 678 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 GPRIN1Q7Z2K8 1008 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 CRYBG2Q8N1P7 616 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 NKD2Q969F2 451 aaPredicted RBP16.6■□□□□ 0.25
SHISA2-201ENST00000319420 PCED1BQ96HM7 432 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 RNF157Q96PX1 679 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 DDX20Q9UHI6 824 aaKnown RBP16.6■□□□□ 0.25
SHISA2-201ENST00000319420 AGTP01019 485 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 USP17L7P0C7H9 530 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 TKTL1P51854 596 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 ITGA7Q13683 1181 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 ANKRD20A8PQ5CZ79 823 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 PAQR9Q6ZVX9 377 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 MAP7D3Q8IWC1 876 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 PLD5Q8N7P1 536 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 GDAP1Q8TB36 358 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 CCDC110Q8TBZ0 833 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 PAIP2Q9BPZ3 127 aaKnown RBP16.6■□□□□ 0.25
SHISA2-201ENST00000319420 ETNK2Q9NVF9 386 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 PIH1D1Q9NWS0 290 aaKnown RBP16.6■□□□□ 0.25
SHISA2-201ENST00000319420 AP4E1Q9UPM8 1137 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 NAALADL1Q9UQQ1 740 aa16.6■□□□□ 0.25
SHISA2-201ENST00000319420 EXOC1LA0A1B0GW35 172 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 GOT1P17174 413 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 AMPD1P23109 780 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHISA2-201ENST00000319420 HIF1AQ16665 826 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 RNASEH2BQ5TBB1 312 aaKnown RBP16.59■□□□□ 0.25
SHISA2-201ENST00000319420 ARHGAP17Q68EM7 881 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 ZCCHC9Q8N567 271 aaKnown RBP16.59■□□□□ 0.25
SHISA2-201ENST00000319420 DYDC1Q8WWB3 177 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 ATXN2LQ8WWM7 1075 aaKnown RBP16.59■□□□□ 0.25
SHISA2-201ENST00000319420 CPT1BQ92523 772 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 PRMT1Q99873 361 aaKnown RBP16.59■□□□□ 0.25
SHISA2-201ENST00000319420 SYT15Q9BQS2 421 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 NRP1O14786 923 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 GPR182O15218 404 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 TMEM63AO94886 807 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 NPR3P17342 541 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 DESP17661 470 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 CYP2F1P24903 491 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 HOXC8P31273 242 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 LIG3P49916 1009 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 CLEC20AQ6ZU45 233 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 PQLC3Q8N755 202 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 RAET1EQ8TD07 263 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 TMEM209Q96SK2 561 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 FAM129AQ9BZQ8 928 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 KIF9Q9HAQ2 790 aa16.59■□□□□ 0.25
SHISA2-201ENST00000319420 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
SHISA2-201ENST00000319420 M0QYT0 321 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 APOL1O14791 398 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 CAV1Q03135 178 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 IFT88Q13099 833 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 BBOF1Q8ND07 529 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 ULBP1Q9BZM6 244 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.58■□□□□ 0.25
SHISA2-201ENST00000319420 CHMP2BQ9UQN3 213 aa16.58■□□□□ 0.25
SHISA2-201ENST00000319420 SPAG7O75391 227 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 ZBED1O96006 694 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 FAM200BP0CF97 657 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 LPIN1Q14693 890 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 BOLA3Q53S33 107 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 XKR4Q5GH76 650 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 TTC13Q8NBP0 860 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 SLC7A14Q8TBB6 771 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 PRCCQ92733 491 aaPredicted RBP16.58■□□□□ 0.24
SHISA2-201ENST00000319420 CAPNS2Q96L46 248 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 DUSP16Q9BY84 665 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.24
SHISA2-201ENST00000319420 INTS9Q9NV88 658 aaKnown RBP16.58■□□□□ 0.24
SHISA2-201ENST00000319420 SEPT10Q9P0V9 454 aa16.58■□□□□ 0.24
SHISA2-201ENST00000319420 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.24
SHISA2-201ENST00000319420 YJEFN3A6XGL0 299 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 E7ENQ6 273 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 APRTP07741 180 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 DRD4P21917 467 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 BDNFP23560 247 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 FAF2Q96CS3 445 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 TRIM56Q9BRZ2 755 aaKnown RBP16.57■□□□□ 0.24
SHISA2-201ENST00000319420 NUDT5Q9UKK9 219 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 IGHA2P01877 340 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 GSCP56915 257 aaPredicted RBP16.57■□□□□ 0.24
SHISA2-201ENST00000319420 MPP2Q14168 576 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 BSPRYQ5W0U4 402 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 MFSD5Q6N075 450 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 TP53INP2Q8IXH6 220 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 PYROXD1Q8WU10 500 aa16.57■□□□□ 0.24
SHISA2-201ENST00000319420 ROPN1BQ9BZX4 212 aaPredicted RBP16.57■□□□□ 0.24
SHISA2-201ENST00000319420 ROPN1Q9HAT0 212 aaPredicted RBP16.57■□□□□ 0.24
SHISA2-201ENST00000319420 PRG3Q9Y2Y8 225 aaPredicted RBP16.57■□□□□ 0.24
SHISA2-201ENST00000319420 MYO18AQ92614 2054 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms