RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 USP3Q9Y6I4 520 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 DOCK3Q8IZD9 2030 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 PIAS1O75925 651 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 RBL1P28749 1068 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 SDC4P31431 198 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 KRT81Q14533 505 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 KBTBD12Q3ZCT8 623 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 XKR4Q5GH76 650 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 C1orf228Q6PIY5 440 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 C4orf22Q6V702 233 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 UTP4Q969X6 686 aaKnown RBP14.34□□□□□ -0.11
ATG4C-201ENST00000317868 EIF2AQ9BY44 585 aaKnown RBP14.34□□□□□ -0.11
ATG4C-201ENST00000317868 GPATCH2LQ9NWQ4 482 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 SNX9Q9Y5X1 595 aa14.34□□□□□ -0.11
ATG4C-201ENST00000317868 IQANK1A0A1B0GTG1 560 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 MBLAC1A4D2B0 266 aaPredicted RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 PIRO00625 290 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 DCTN3O75935 186 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 ATP5HO75947 161 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TOMM70O94826 608 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 T-ENOLP0DO92 83 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TFE3P19532 575 aaPredicted RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 L1CAMP32004 1257 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 ATP11AP98196 1134 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 PTK7Q13308 1070 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 PARP6Q2NL67 630 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 PLEKHG4Q58EX7 1191 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 C9orf57Q5W0N0 161 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 CRYBG2Q8N1P7 616 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 MRRFQ96E11 262 aaKnown RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TXLNGQ9NUQ3 528 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 MKS1Q9NXB0 559 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 H7C0C1 242 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TRAFD1O14545 582 aaPredicted RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 KCNN4O15554 427 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 GCATO75600 419 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 GSTA2P09210 222 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 ATP5OP48047 213 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 SLC45A4Q5BKX6 768 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 PRPF39Q86UA1 669 aaKnown RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TAB3Q8N5C8 712 aaPredicted RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 LRRC39Q96DD0 335 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 MAML3Q96JK9 1138 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TMEM237Q96Q45 408 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TACO1Q9BSH4 297 aaKnown RBP14.33□□□□□ -0.12
ATG4C-201ENST00000317868 DPEP3Q9H4B8 488 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 EBF2Q9HAK2 575 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 TRIM33Q9UPN9 1127 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.12
ATG4C-201ENST00000317868 PDHXO00330 501 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 AVILO75366 819 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 WFS1O76024 890 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 TPSB2P20231 275 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 EPHX2P34913 555 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 CCNFP41002 786 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 BCAR1P56945 870 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 TPSAB1Q15661 275 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 CTC1Q2NKJ3 1217 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 BNIPLQ7Z465 357 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 SCUBE3Q8IX30 993 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.32□□□□□ -0.12
ATG4C-201ENST00000317868 INPP5DQ92835 1189 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 PTPRN2Q92932 1015 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 B3GNT5Q9BYG0 378 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 RAB6BQ9NRW1 208 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 GDAP2Q9NXN4 497 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 RRN3P2A6NIE6 340 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 TRDMT1O14717 391 aaKnown RBP14.32□□□□□ -0.12
ATG4C-201ENST00000317868 CDC42EP1Q00587 391 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 SLC10A2Q12908 348 aaPredicted RBP14.32□□□□□ -0.12
ATG4C-201ENST00000317868 MTM1Q13496 603 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 DGKDQ16760 1214 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 KIF2BQ8N4N8 673 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 C7orf31Q8N865 590 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 ANKRD52Q8NB46 1076 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 C18orf25Q96B23 403 aaPredicted RBP14.32□□□□□ -0.12
ATG4C-201ENST00000317868 LRRC37BQ96QE4 947 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 NGRNQ9NPE2 291 aaKnown RBP14.32□□□□□ -0.12
ATG4C-201ENST00000317868 FAM49BQ9NUQ9 324 aa14.32□□□□□ -0.12
ATG4C-201ENST00000317868 KLF11O14901 512 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 CYP2F1P24903 491 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SNX16P57768 344 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 ADAM17P78536 824 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 BST2Q10589 180 aaKnown RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 PRKD1Q15139 912 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 KIZQ2M2Z5 673 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 APBB1IPQ7Z5R6 666 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SLC26A11Q86WA9 606 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 BEST2Q8NFU1 509 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SLC7A6OSQ96CW6 309 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 OLFM3Q96PB7 478 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms