RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ADAM9Q13443 819 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SLC12A1Q13621 1099 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 RNF220Q5VTB9 566 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CCDC103Q8IW40 242 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TBATAQ96M53 351 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ELP3Q9H9T3 547 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CHMP1AQ9HD42 196 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 UBE2TQ9NPD8 197 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 ATAD3AQ9NVI7 634 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 FGFR1OP2Q9NVK5 253 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KANSL3Q9P2N6 904 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SLC17A7Q9P2U7 560 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 HAO1Q9UJM8 370 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PCDHA12Q9UN75 941 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ATP8B3O60423 1300 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PALM3A6NDB9 673 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 RFX1P22670 979 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KRR1Q13601 381 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 PKN2Q16513 984 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 TAS2R42Q7RTR8 314 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SGMS1Q86VZ5 419 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.74□□□□□ -1.81
GEN1-201ENST00000317402 RBMX2Q9Y388 322 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 RPTORQ8N122 1335 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 MSH4O15457 936 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 HAUS5O94927 633 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 OR6B1O95007 311 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 MT-CO1P00395 513 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 EIF2S1P05198 315 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 SERPINB10P48595 397 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 RAB14P61106 215 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KPNB1Q14974 876 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 ASTE1Q2TB18 679 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 PAN2Q504Q3 1202 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 TMEM53Q6P2H8 277 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 RNF19BQ6ZMZ0 732 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ALYREFQ86V81 257 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 CERKQ8TCT0 537 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NUP85Q9BW27 656 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TMCO1Q9UM00 188 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 N6AMT1Q9Y5N5 214 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PPEF2O14830 753 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 B4GALT5O43286 388 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 UBOX5O94941 541 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 HMGCS2P54868 508 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PTGISQ16647 500 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PLEKHG4Q58EX7 1191 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 GLRA4Q5JXX5 417 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 STYK1Q6J9G0 422 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ATG4CQ96DT6 458 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KREMEN1Q96MU8 473 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 DNAJC7Q99615 494 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 APOBEC3GQ9HC16 384 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 FARSBQ9NSD9 589 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 ZNF212Q9UDV6 495 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CYTH4Q9UIA0 394 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NUDT5Q9UKK9 219 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 GMNCA6NCL1 334 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 GNB5O14775 395 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 RASGRF2O14827 1237 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PGM3O95394 542 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CST3P01034 146 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 RARAP10276 462 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TSPAN8P19075 237 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PUDPQ08623 228 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SLC29A2Q14542 456 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NT5DC1Q5TFE4 455 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SWSAP1Q6NVH7 229 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TATDN1Q6P1N9 297 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ADCK1Q86TW2 530 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ICA1LQ8NDH6 482 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 UBA3Q8TBC4 463 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CEP19Q96LK0 163 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TRIM15Q9C019 465 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 FAM96AQ9H5X1 160 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 HACL1Q9UJ83 578 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 DCTN4Q9UJW0 460 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 WASF2Q9Y6W5 498 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 IGF2BP3O00425 579 aaKnown RBP eCLIP3.73□□□□□ -1.81
GEN1-201ENST00000317402 LIN7AO14910 233 aaPredicted RBP3.73□□□□□ -1.81
GEN1-201ENST00000317402 ATP6V1G2O95670 118 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 SRGAP2CP0DJJ0 459 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 C4BPBP20851 252 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 CA4P22748 312 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 GCAP28676 217 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 UAP1L1Q3KQV9 507 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 FNBP1LQ5T0N5 605 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 ANKRD34AQ69YU3 496 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 GADL1Q6ZQY3 521 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 DAW1Q8N136 415 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 LMNTD1Q8N9Z9 388 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 KCTD4Q8WVF5 259 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 TLR9Q9NR96 1032 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 ANKFY1Q9P2R3 1169 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 PRR12Q9ULL5 1215 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 ZSWIM8A7E2V4 1837 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 TMEM247A6NEH6 219 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 XPO1O14980 1071 aaKnown RBP3.73□□□□□ -1.81
GEN1-201ENST00000317402 OR52Z1P0C646 297 aa3.73□□□□□ -1.81
GEN1-201ENST00000317402 ATF7P17544 494 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms