RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NCBP2-AS2Q69YL0 99 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 TRIM50Q86XT4 487 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CCDC197Q8NCU1 140 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 STK32AQ8WU08 396 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 SLC2A13Q96QE2 648 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 HHIPQ96QV1 700 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 UGT1A7Q9HAW7 530 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 UGT1A10Q9HAW8 530 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 UGT1A8Q9HAW9 530 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 WDR6Q9NNW5 1121 aaKnown RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CISHQ9NSE2 258 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ACOT8O14734 319 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 FAM13AO94988 1023 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ATP6V1C1P21283 382 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 YBX1P67809 324 aaKnown RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 NOP14P78316 857 aaKnown RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 WASHC5Q12768 1159 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 SCAPQ12770 1279 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 XKR3Q5GH77 459 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 FBXL19Q6PCT2 694 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 CCDC174Q6PII3 467 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ALDH16A1Q8IZ83 802 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 CACNA2D3Q8IZS8 1091 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 SCML4Q8N228 414 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 RBBP8NLQ8NC74 664 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TRIM56Q9BRZ2 755 aaKnown RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 EIF2B3Q9NR50 452 aaKnown RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 SAE1Q9UBE0 346 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ANAPC7Q9UJX3 599 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 EME2A4GXA9 379 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TPSB2P20231 275 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 MGAT3Q09327 533 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 MESDQ14696 234 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TPSAB1Q15661 275 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 P3H1Q32P28 736 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 DENND5AQ6IQ26 1287 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TTC7BQ86TV6 843 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 KBTBD6Q86V97 674 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 MCF2L2Q86YR7 1114 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 RTP3Q9BQQ7 232 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 DEF6Q9H4E7 631 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 NXF1Q9UBU9 619 aaKnown RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 C2orf16Q68DN1 1984 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 C9IYK1 514 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 F8W8V4 182 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 B4GALT5O43286 388 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 METTL18O95568 372 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 CXCL10P02778 98 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ATF7P17544 494 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TCF7P36402 384 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 RFC5P40937 340 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 CLCN2P51788 898 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 EMP3P54852 163 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 FAAP100Q0VG06 881 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 HSDL1Q3SXM5 330 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ARHGAP17Q68EM7 881 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 CROCCP2Q86T23 111 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 TTC8Q8TAM2 541 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ADAMTS16Q8TE57 1224 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 CDK5RAP3Q96JB5 506 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 POLR3FQ9H1D9 316 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-201ENST00000315544 ECT2Q9H8V3 914 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 VTA1Q9NP79 307 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 HOMER3Q9NSC5 361 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 PARVAQ9NVD7 372 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 SLC9A2Q9UBY0 812 aa8.17□□□□□ -1.1
CNOT4-201ENST00000315544 A0A1B0GUA9 196 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 FESP07332 822 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 SPATA31D3P0C874 917 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 TNFAIP3P21580 790 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 CD68P34810 354 aaPredicted RBP8.16□□□□□ -1.1
CNOT4-201ENST00000315544 MYL6P60660 151 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 TFDP1Q14186 410 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 CELF3Q5SZQ8 465 aaKnown RBP8.16□□□□□ -1.1
CNOT4-201ENST00000315544 UGT2A3Q6UWM9 527 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 NSMFQ6X4W1 530 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 SPATA31D4Q6ZUB0 917 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 MARK2Q7KZI7 788 aaKnown RBP8.16□□□□□ -1.1
CNOT4-201ENST00000315544 TMEM135Q86UB9 458 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 THNSL1Q8IYQ7 743 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 ACVR1CQ8NER5 493 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 ATP2A3Q93084 1043 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 FATE1Q969F0 183 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 ZNF653Q96CK0 615 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 NSMCE3Q96MG7 304 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 SPAG5Q96R06 1193 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 TMEM121Q9BTD3 319 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 CDT1Q9H211 546 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 GABBR1Q9UBS5 961 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 MFHAS1Q9Y4C4 1052 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 A6NJR5 290 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 DKC1O60832 514 aaKnown RBP eCLIP8.16□□□□□ -1.1
CNOT4-201ENST00000315544 SORBS2O94875 1100 aaKnown RBP8.16□□□□□ -1.1
CNOT4-201ENST00000315544 ADRA1DP25100 572 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 ADRA1AP35348 466 aa8.16□□□□□ -1.1
CNOT4-201ENST00000315544 RPL26P61254 145 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms