RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FBXL19Q6PCT2 694 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 GET4Q7L5D6 327 aaPredicted RBP13.94□□□□□ -0.18
RFFL-201ENST00000315249 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 IL31RAQ8NI17 732 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 SERPINB9P50453 376 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 PRKCZQ05513 592 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 PPTC7Q8NI37 304 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 CXorf38Q8TB03 319 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 GPR152Q8TDT2 470 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 SPACA6W5XKT8 324 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
RFFL-201ENST00000315249 TMEM86AQ8N2M4 240 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 STAMBPL1Q96FJ0 436 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 PTPN1P18031 435 aaKnown RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 MAGEA4P43358 317 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 CREMQ03060 361 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 AARS2Q5JTZ9 985 aaKnown RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 DNAAF5Q86Y56 855 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 GRIN3AQ8TCU5 1115 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 SPIRE2Q8WWL2 714 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ZNF606Q8WXB4 792 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 MED8Q96G25 268 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 TISP43B9A030 160 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 VPS26AO75436 327 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ALOX15P16050 662 aaPredicted RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 YWHAZP63104 245 aaKnown RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 NFIL3Q16649 462 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 TTC39BQ5VTQ0 682 aaPredicted RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 ZNF438Q7Z4V0 828 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ZDHHC6Q9H6R6 413 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ANKRD63C9JTQ0 380 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 F8VZ95 297 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 GLRA2P23416 452 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 FAM83EQ2M2I3 478 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 C1orf146Q5VVC0 180 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ILDR2Q71H61 639 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ANKS1AQ92625 1134 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ROBO1Q9Y6N7 1651 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 TRDMT1O14717 391 aaKnown RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 CENPAP49450 140 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 THOP1P52888 689 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 FBXO38Q6PIJ6 1188 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 TKTL2Q9H0I9 626 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 MEIS2O14770 477 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 PCNAP12004 261 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 PTAR1Q7Z6K3 402 aaPredicted RBP13.93□□□□□ -0.18
RFFL-201ENST00000315249 BRSK2Q8IWQ3 736 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 C1QTNF7Q9BXJ2 289 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 ING2Q9H160 280 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 DTNAQ9Y4J8 743 aa13.93□□□□□ -0.18
RFFL-201ENST00000315249 PPM1AP35813 382 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 NCALDP61601 193 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 PSMC3IPQ9P2W1 217 aaPredicted RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 SPATA31C2B4DYI2 1134 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 SLC9A3R1O14745 358 aaPredicted RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 SOAT2O75908 522 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 OTUD4Q01804 1114 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 CDC16Q13042 620 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 SDHAF4Q5VUM1 108 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 IRAK1BP1Q5VVH5 260 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 SYN2Q92777 582 aaPredicted RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 UROC1Q96N76 676 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 TARSL2A2RTX5 802 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 LSM8O95777 96 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 SERAC1Q96JX3 654 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 IGSF6O95976 241 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 NFICP08651 508 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 SERPINF2P08697 491 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 POU6F1Q14863 301 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 TTI2Q6NXR4 508 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 CEP68Q76N32 757 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 ULBP1Q9BZM6 244 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 CHCHD3Q9NX63 227 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 DNMT3LQ9UJW3 386 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 ARHGAP26Q9UNA1 814 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 FMN2Q9NZ56 1722 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 RNF103-CHMP3A0A140T963 221 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 SYCE1LA8MT33 242 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 DYRK3O43781 588 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 ATP9AO75110 1047 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 TOMM70O94826 608 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 STIP1P31948 543 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 CENPCQ03188 943 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms