RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PABPC1LQ4VXU2 614 aaKnown RBP13.96□□□□□ -0.18
SKA3-202ENST00000314759 RAPH1Q70E73 1250 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 TRIM42Q8IWZ5 723 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 OPTNQ96CV9 577 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 POPDC2Q9HBU9 364 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 STK32BQ9NY57 414 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 ZC3H7BQ9UGR2 993 aaKnown RBP13.96□□□□□ -0.18
SKA3-202ENST00000314759 A6NJR5 290 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 ADCY3O60266 1144 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 CIB2O75838 187 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 GRIA2P42262 883 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 CDK7P50613 346 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 AP2B1P63010 937 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 CFAP157Q5JU67 520 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 SH3PXD2AQ5TCZ1 1133 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 SNRNP48Q6IEG0 339 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 CDHR1Q96JP9 859 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 NXF1Q9UBU9 619 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 H7C0C1 242 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 PRKCHP24723 683 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 ATP5OP48047 213 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 GRM1Q13255 1194 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 UBAP2LQ14157 1087 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 RAB6CQ53S08 254 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 FAXCQ5TGI0 409 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 C1orf146Q5VVC0 180 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 CAND1Q86VP6 1230 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 EBF4Q9BQW3 602 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 RAB6CQ9H0N0 254 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 NDE1Q9NXR1 346 aa13.95□□□□□ -0.18
SKA3-202ENST00000314759 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
SKA3-202ENST00000314759 SIP14410 1827 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 HMX2A2RU54 273 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 WNT10BO00744 389 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 SNNO75324 88 aaPredicted RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 CRABP2P29373 138 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CDH6P55285 790 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 DNAL1Q4LDG9 190 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 C6orf163Q5TEZ5 329 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 WDR78Q5VTH9 848 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CRLF3Q8IUI8 442 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 RILPQ96NA2 401 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 TRIM56Q9BRZ2 755 aaKnown RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
SKA3-202ENST00000314759 MSCO60682 206 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 TOM1L1O75674 476 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 ENDOD1O94919 500 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CSH1P0DML2 217 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CSH2P0DML3 217 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CPOXP36551 454 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CDH8P55286 799 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CBLBQ13191 982 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 LSAMPQ13449 338 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 ZCCHC23Q6ZST2 131 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 CYP4V2Q6ZWL3 525 aaPredicted RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 A0A088AWK7 358 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 TRDMT1O14717 391 aaKnown RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 KCNN4O15554 427 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 CREB3O43889 395 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 SERPINA6P08185 405 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 HOXC6P09630 235 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 YY1P25490 414 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 INHBCP55103 352 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 LGSNQ5TDP6 509 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 NDUFAF2Q8N183 169 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 MTMR14Q8NCE2 650 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 NIFKQ9BYG3 293 aaKnown RBP13.94□□□□□ -0.18
SKA3-202ENST00000314759 C1orf21Q9H246 121 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 PREBQ9HCU5 417 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 ETNK2Q9NVF9 386 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 PAK5Q9P286 719 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 TBC1D30Q9Y2I9 924 aa13.94□□□□□ -0.18
SKA3-202ENST00000314759 SDR42E2A6NKP2 422 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 MEI4A8MW99 385 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 OR6B1O95007 311 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 BPGMP07738 259 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 APRTP07741 180 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 CDK18Q07002 472 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 MROH9Q5TGP6 573 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 TMCO4Q5TGY1 634 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 RNF111Q6ZNA4 994 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 MARK2Q7KZI7 788 aaKnown RBP13.93□□□□□ -0.18
SKA3-202ENST00000314759 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 SLC4A11Q8NBS3 891 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 VCX3BQ9H321 246 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 GPAMQ9HCL2 828 aa13.93□□□□□ -0.18
SKA3-202ENST00000314759 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms