RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SERAC1Q96JX3 654 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 PRDM5Q9NQX1 630 aaPredicted RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 PDE4DIPQ5VU43 2346 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ITGA4P13612 1032 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 IRAK1P51617 712 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 EIF4E1BA6NMX2 242 aaKnown RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 TRIM49D1C9J1S8 452 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 SASH1O94885 1247 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 C10orf120Q5SQS8 335 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 TDRD5Q8NAT2 981 aaKnown RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 COMMD9Q9P000 198 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 BTBD7Q9P203 1132 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 F5H5T6 163 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ZC3H11AO75152 810 aaKnown RBP eCLIP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 RASA1P20936 1047 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 EXOSC10Q01780 885 aaKnown RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ATF7IP2Q5U623 682 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 FAM71DQ8N9W8 422 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 LRRC40Q9H9A6 602 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 SLC24A2Q9UI40 661 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 F5H6K3 240 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 LSM8O95777 96 aaKnown RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 KLRC3Q07444 240 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 Q96MT0 163 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 RNPEPQ9H4A4 650 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 PHTF1Q9UMS5 762 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 CARNS1A5YM72 827 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF284Q2VY69 593 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 MAP3K14Q99558 947 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 REXO4Q9GZR2 422 aaKnown RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 RAD51CO43502 376 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 MGRN1O60291 552 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 LRG1P02750 347 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 RENBPP51606 427 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 CYP24A1Q07973 514 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 PGS1Q32NB8 556 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 MAGEB10Q96LZ2 347 aaPredicted RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 COILP38432 576 aaPredicted RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 SCTRP47872 440 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 LRRC71Q8N4P6 559 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 KCTD10Q9H3F6 313 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 MFN2O95140 757 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 GOLGA7BQ2TAP0 167 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 ZCCHC7Q8N3Z6 543 aaKnown RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 DLG3Q92796 817 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 PARK7Q99497 189 aaKnown RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 PIH1D3Q9NQM4 214 aaKnown RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF112Q9UJU3 913 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 SIK3Q9Y2K2 1263 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 TRIM43BA6NCK2 446 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 TAF4O00268 1085 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 GH1P01241 217 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 NPR3P17342 541 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 BTKQ06187 659 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 KIF2BQ8N4N8 673 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 ANKS1AQ92625 1134 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 HAVCR1Q96D42 359 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 CST8O60676 142 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 TRAF3Q13114 568 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 PLD1Q13393 1074 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 EMC2Q15006 297 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 DPP7Q9UHL4 492 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 ARID5BQ14865 1188 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 PHACTR4Q8IZ21 702 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 MIEF2Q96C03 454 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 MCCC1Q96RQ3 725 aaPredicted RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 RABGEF1Q9UJ41 708 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 ZCCHC11Q5TAX3 1644 aaKnown RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 COL15A1P39059 1388 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 SUPT7LO94864 414 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 NFYCQ13952 458 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 RASA2Q15283 850 aa15.92■□□□□ 0.14
HCFC1-201ENST00000310441 MB21D2Q8IYB1 491 aaPredicted RBP15.92■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF185O15231 689 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 KCNQ3O43525 872 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 GUCY1B2O75343 617 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 TXNP10599 105 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 HSD17B3P37058 310 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 HK2P52789 917 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 PTGES3Q15185 160 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 C1QTNF7Q9BXJ2 289 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 MYRFQ9Y2G1 1151 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 AFF2P51816 1311 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 ITGALP20701 1170 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 THOC7Q6I9Y2 204 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 SH2D3CQ8N5H7 860 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 COQ6Q9Y2Z9 468 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 COMMD2Q86X83 199 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 CHORDC1Q9UHD1 332 aaPredicted RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 BCLAF3A2AJT9 711 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 COMTP21964 271 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 ESRP1Q6NXG1 681 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 AKAP7Q9P0M2 348 aaPredicted RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 NAGPAQ9UK23 515 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 MSH3P20585 1137 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms