RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 HACE1Q8IYU2 909 aa23.84■■□□□ 1.41
CTSF-201ENST00000310325 ANKRD42Q8N9B4 389 aa23.84■■□□□ 1.41
CTSF-201ENST00000310325 UPF3AQ9H1J1 476 aaKnown RBP23.84■■□□□ 1.41
CTSF-201ENST00000310325 TSPYL2Q9H2G4 693 aaPredicted RBP23.84■■□□□ 1.41
CTSF-201ENST00000310325 PAK5Q9P286 719 aa23.84■■□□□ 1.41
CTSF-201ENST00000310325 SLC24A2Q9UI40 661 aa23.84■■□□□ 1.41
CTSF-201ENST00000310325 PCNTO95613 3336 aa23.84■■□□□ 1.41
CTSF-201ENST00000310325 ATP2C2O75185 946 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 PGK1P00558 417 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 CTSHP09668 335 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 RARBP10826 455 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 PTPN1P18031 435 aaKnown RBP23.83■■□□□ 1.41
CTSF-201ENST00000310325 CYP2F1P24903 491 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 MLH1P40692 756 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 IFT88Q13099 833 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 WSCD1Q658N2 575 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 STRADAQ7RTN6 431 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 TRABD2AQ86V40 505 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 TRIB2Q92519 343 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 WNT8BQ93098 351 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 CABS1Q96KC9 395 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 WDR83Q9BRX9 315 aaKnown RBP23.83■■□□□ 1.41
CTSF-201ENST00000310325 SENP6Q9GZR1 1112 aaPredicted RBP23.83■■□□□ 1.41
CTSF-201ENST00000310325 DHX35Q9H5Z1 703 aaKnown RBP23.83■■□□□ 1.41
CTSF-201ENST00000310325 NRDE2Q9H7Z3 1164 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 CHST12Q9NRB3 414 aa23.83■■□□□ 1.41
CTSF-201ENST00000310325 BCLAF3A2AJT9 711 aaKnown RBP23.83■■□□□ 1.4
CTSF-201ENST00000310325 FAM155AB1AL88 458 aaPredicted RBP23.83■■□□□ 1.4
CTSF-201ENST00000310325 GABRDO14764 452 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 KCNN4O15554 427 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 ACAT1P24752 427 aaKnown RBP23.83■■□□□ 1.4
CTSF-201ENST00000310325 MAGEA9P43362 315 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 ADIGQ0VDE8 80 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 MPP2Q14168 576 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 KCNJ11Q14654 390 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 RASA2Q15283 850 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 EFHC2Q5JST6 749 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 OTUD6BQ8N6M0 293 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 FBXO36Q8NEA4 188 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 SPC25Q9HBM1 224 aa23.83■■□□□ 1.4
CTSF-201ENST00000310325 ZBED1O96006 694 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 VIMP08670 466 aaKnown RBP23.82■■□□□ 1.4
CTSF-201ENST00000310325 NPR3P17342 541 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 MATKP42679 507 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 BBS9Q3SYG4 887 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 SERINC5Q86VE9 423 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 GSTCDQ8NEC7 633 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 NSRP1Q9H0G5 558 aaKnown RBP23.82■■□□□ 1.4
CTSF-201ENST00000310325 FETUBQ9UGM5 382 aa23.82■■□□□ 1.4
CTSF-201ENST00000310325 CLDN5O00501 218 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 CHADO15335 359 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 TSHRP16473 764 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 RBL1P28749 1068 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 FCGRTP55899 365 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 ARHGEF18Q6ZSZ5 1173 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 PAQR9Q6ZVX9 377 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 SENP8Q96LD8 212 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 MTMR10Q9NXD2 777 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 NKIRAS1Q9NYS0 192 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 PSMC3IPQ9P2W1 217 aaPredicted RBP23.81■■□□□ 1.4
CTSF-201ENST00000310325 RABGEF1Q9UJ41 708 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 DAB1O75553 588 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 CHRNA1P02708 482 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 THP07101 528 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 ZFXP17010 805 aaPredicted RBP23.81■■□□□ 1.4
CTSF-201ENST00000310325 SSTR1P30872 391 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 ADCY1Q08828 1119 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 PPP1R21Q6ZMI0 780 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 TAX1BP1Q86VP1 789 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 DEFB106AQ8N104 65 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 CCDC185Q8N715 623 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 KCTD13Q8WZ19 329 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 FAM149B1Q96BN6 582 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 KCTD15Q96SI1 283 aaPredicted RBP23.81■■□□□ 1.4
CTSF-201ENST00000310325 GAD1Q99259 594 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 ARHGAP39Q9C0H5 1083 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 CACNG4Q9UBN1 327 aa23.81■■□□□ 1.4
CTSF-201ENST00000310325 CA12O43570 354 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 IGFBP6P24592 240 aaPredicted RBP23.8■■□□□ 1.4
CTSF-201ENST00000310325 GEMIN4P57678 1058 aaKnown RBP23.8■■□□□ 1.4
CTSF-201ENST00000310325 SLC25A52Q3SY17 297 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 MDH1BQ5I0G3 518 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 CLEC20AQ6ZU45 233 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 PIGWQ7Z7B1 504 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 CDKL3Q8IVW4 592 aaPredicted RBP23.8■■□□□ 1.4
CTSF-201ENST00000310325 CKAP2Q8WWK9 683 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 MED10Q9BTT4 135 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 RAB6BQ9NRW1 208 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 DDX43Q9NXZ2 648 aaKnown RBP23.8■■□□□ 1.4
CTSF-201ENST00000310325 SENP1Q9P0U3 644 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 GABRQQ9UN88 632 aa23.8■■□□□ 1.4
CTSF-201ENST00000310325 BEST1O76090 585 aa23.79■■□□□ 1.4
CTSF-201ENST00000310325 SULT1E1P49888 294 aa23.79■■□□□ 1.4
CTSF-201ENST00000310325 MRPS5P82675 430 aaKnown RBP23.79■■□□□ 1.4
CTSF-201ENST00000310325 MGAT3Q09327 533 aa23.79■■□□□ 1.4
CTSF-201ENST00000310325 PKN2Q16513 984 aaKnown RBP23.79■■□□□ 1.4
CTSF-201ENST00000310325 RNF187Q5TA31 235 aaPredicted RBP23.79■■□□□ 1.4
CTSF-201ENST00000310325 C3orf62Q6ZUJ4 267 aa23.79■■□□□ 1.4
CTSF-201ENST00000310325 PALM2Q8IXS6 379 aa23.79■■□□□ 1.4
CTSF-201ENST00000310325 TMEM86AQ8N2M4 240 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms