RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FGFR1P11362 822 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 IL4RP24394 825 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 LDLRAD1Q5T700 205 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 SUGP1Q8IWZ8 645 aaKnown RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 ZNF75CPQ92670 426 aaPredicted RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 SNX27Q96L92 541 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 FRMD8P1Q9BZ68 369 aaPredicted RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 PAK5Q9P286 719 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 GJD2Q9UKL4 321 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 AP4E1Q9UPM8 1137 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 SPTLC1O15269 473 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 CREB3O43889 395 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 GABBR2O75899 941 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 AMPD1P23109 780 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 IRX4P78413 519 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 NME3Q13232 169 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 PDK4Q16654 411 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 DCAF6Q58WW2 860 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 C9orf57Q5W0N0 161 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 ZNF410Q86VK4 478 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
PTPN2-201ENST00000309660 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
PTPN2-201ENST00000309660 SLC35F5Q8WV83 523 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 MYLK2Q9H1R3 596 aa12□□□□□ -0.49
PTPN2-201ENST00000309660 KPNA7A9QM74 516 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 PRPF4O43172 522 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TREHO43280 583 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TYROBPO43914 113 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 GSTA1P08263 222 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 RARBP10826 455 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ALDH3A1P30838 453 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 GRIA1P42261 906 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 CRADDP78560 199 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TAZQ16635 292 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 PLEKHH3Q7Z736 793 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 CCDC185Q8N715 623 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 GBP7Q8N8V2 638 aaPredicted RBP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 CCNYQ8ND76 341 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 NOD2Q9HC29 1040 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 HAO1Q9UJM8 370 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 L3MBTL1Q9Y468 752 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TRIP11Q15643 1979 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 A0A0G2JMZ2 1700 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 IQANK1A0A1B0GTG1 560 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TRIM49D1C9J1S8 452 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 KRT16P08779 473 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 PDK2Q15119 407 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 STILQ15468 1287 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 FYB2Q5VWT5 728 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 KCNT2Q6UVM3 1135 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 OTOAQ7RTW8 1153 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 APBB1IPQ7Z5R6 666 aaPredicted RBP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 NME8Q8N427 588 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 APPL2Q8NEU8 664 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 DCAKDQ8WVC6 231 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 SERAC1Q96JX3 654 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ZFP42Q96MM3 310 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 MED10Q9BTT4 135 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 KATNBL1Q9H079 304 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 NRDE2Q9H7Z3 1164 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 USP29Q9HBJ7 922 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TIMM13Q9Y5L4 95 aaPredicted RBP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 SMIM28A0A1B0GU29 152 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 CCDC195A0A1B0GUA6 201 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 UGT1A9O60656 530 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ATP6V1G2O95670 118 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 GOT1P17174 413 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 CYP2B6P20813 491 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 GTF2A2P52657 109 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 YWHAZP63104 245 aaKnown RBP11.99□□□□□ -0.49
PTPN2-201ENST00000309660 GPR162Q16538 588 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 DENND5BQ6ZUT9 1274 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 LRRC6Q86X45 466 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 VPS52Q8N1B4 723 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TTC39CQ8N584 583 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■■■□ 20.1
PTPN2-201ENST00000309660 MS4A4AQ96JQ5 239 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 TBCBQ99426 244 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 PLCD4Q9BRC7 762 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 UGT1A7Q9HAW7 530 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 UGT1A10Q9HAW8 530 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 UGT1A8Q9HAW9 530 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ETNK2Q9NVF9 386 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 COL1A2P08123 1366 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 CITO14578 2027 aa11.99□□□□□ -0.49
PTPN2-201ENST00000309660 ANK1P16157 1881 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 EDF1O60869 148 aaKnown RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 HUS1O60921 280 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 CBX6O95503 412 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 METTL18O95568 372 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 PITX1P78337 314 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 ADIGQ0VDE8 80 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms